Gene overview
| Strategies/Algorithm: | closest | Ensembl ID: | ENSG00000234601 |
| Gene: | CHRM3-AS1 | Gene type: | lncRNA |
| Strand: | - | External links: |
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| Genomic region: | chr1:239898016-239899872 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_01_011100013 | chr1:239758519-239899310 |
Sample_01_0111 | Brain | SK-N-SH | 13 | 64 | 4003 | 7 | 9 | 309 | 165 | CHRM3,CHRM3-AS1,CHRM3-AS2 |
| SE_02_110400037 | chr1:239791775-239899368 |
Sample_02_1104 | Brain | NB-69 | 37 | 43 | 3014 | 5 | 8 | 216 | 165 | CHRM3,CHRM3-AS1 |
| SE_02_096200232 | chr1:239795305-239841329 |
Sample_02_0962 | Brain | H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells | 232 | 16 | 1305 | 4 | 5 | 114 | 82 | CHRM3,CHRM3-AS1 |
| SE_02_075501340 | chr1:239808181-239818700 |
Sample_02_0755 | Embryo | ES-derived progenitors_DE FOXA2 -/- | 1340 | 2 | 335 | 1 | 0 | 15 | 0 | CHRM3,CHRM3-AS1 |
| SE_02_074100932 | chr1:239809274-239818034 |
Sample_02_0741 | Muscle | RH30 | 932 | 5 | 277 | 0 | 0 | 12 | 0 | CHRM3,CHRM3-AS1,GREM2 |
| SE_02_124200405 | chr1:239831292-239898529 |
Sample_02_1242 | Skin | UISO_virus_negative | 405 | 40 | 1844 | 1 | 5 | 148 | 83 | CHRM3,CHRM3-AS1 |
| SE_02_141001014 | chr1:239833517-239915703 |
Sample_02_1410 | Brain | GSC6 | 1014 | 13 | 2284 | 5 | 5 | 241 | 367 | CHRM3,CHRM3-AS1 |
| SE_02_149900097 | chr1:239859810-239898281 |
Sample_02_1499 | Brain | BE_2_-C | 97 | 19 | 1108 | 1 | 3 | 61 | 83 | CHRM3,CHRM3-AS1 |
| SE_02_054200152 | chr1:239863227-239899099 |
Sample_02_0542 | Brain | Kelly_ResJQ1 | 152 | 8 | 1067 | 1 | 3 | 62 | 83 | CHRM3,CHRM3-AS1 |
| SE_02_054400208 | chr1:239863428-239898931 |
Sample_02_0544 | Brain | Kelly_ResVeh | 208 | 17 | 1053 | 1 | 3 | 62 | 83 | CHRM3,CHRM3-AS1 |
| SE_02_106300251 | chr1:239865394-239898215 |
Sample_02_1063 | Brain | CLB-GA-control | 251 | 7 | 972 | 1 | 3 | 61 | 83 | CHRM3,CHRM3-AS1 |
| SE_02_150000108 | chr1:239866952-239898241 |
Sample_02_1500 | Brain | KELLY_untreat | 108 | 13 | 932 | 1 | 3 | 61 | 83 | CHRM3,CHRM3-AS1 |
| SE_02_106400289 | chr1:239867369-239898208 |
Sample_02_1064 | Brain | CLB-GA-Dinaciclib_8h | 289 | 6 | 924 | 1 | 3 | 61 | 83 | CHRM3,CHRM3-AS1 |
| SE_02_155400932 | chr1:239870236-239898230 |
Sample_02_1554 | Gastrointestinal Stromal | GIST-3_KIT e11 | 932 | 10 | 827 | 1 | 3 | 60 | 83 | CHRM3,CHRM3-AS1,CHRM3-AS2 |
| SE_02_122100805 | chr1:239911342-239923248 |
Sample_02_1221 | Bone marrow | KMS11 | 805 | 3 | 335 | 2 | 0 | 8 | 0 | CHRM3-AS1 |
Genomic distribution of SEs associated with CHRM3-AS1