SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID:
Gene: ASAM Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_031200298 chr11:123099772-123212051 Sample_02_0312 Neuroblastoma SK-N-BE_2-C 298 18 3523 255 11 244 209 ASAM,HSPA8
SE_01_008600099 chr11:123100085-123197146 Sample_01_0086 Thoracic aorta thoracic-aorta 99 11 3048 245 8 218 209 ASAM,HSPA8
SE_01_007000082 chr11:123100160-123197069 Sample_01_0070 Ascending aorta ascending-aorta 82 11 3037 245 8 218 209 ASAM,HSPA8
SE_02_017200171 chr11:123100436-123261789 Sample_02_0172 Lung IMR-90_quiescent 171 34 4979 264 17 305 209 ASAM,HSPA8
SE_01_006400148 chr11:123100671-123176868 Sample_01_0064 Brain: derived from metastatic site: supra-orbital area SK-N-MC 148 12 2405 218 8 133 0 ASAM,HSPA8
SE_02_040100034 chr11:123100899-123198818 Sample_02_0401 Mammary gland SUM159PT-T47D 34 21 3065 247 8 218 209 ASAM,HSPA8
SE_02_017100155 chr11:123103008-123203350 Sample_02_0171 Lung IMR-90_proliferating 155 24 3165 246 8 230 209 ASAM,HSPA8
SE_02_039500061 chr11:123110217-123198926 Sample_02_0395 Mammary gland BT-549 61 19 2799 218 8 206 209 ASAM,HSPA8
SE_02_010700699 chr11:123111059-123147456 Sample_02_0107 Endometrium EEC16 699 5 1190 121 4 51 0 ASAM,HSPA8
SE_02_011000125 chr11:123111068-123220497 Sample_02_0110 Ovaries IOE11 125 12 3414 221 11 232 209 ASAM,HSPA8
SE_03_000800434 chr11:123111180-123196330 Sample_03_0008 Lung A549_dexamethasone_7h 434 9 2679 209 8 206 209 ASAM,HSPA8
SE_01_005600149 chr11:123111235-123198960 Sample_01_0056 Bone osteoblast 149 11 2760 213 8 206 209 ASAM,HSPA8
SE_02_005600120 chr11:123111512-123212001 Sample_02_0056 Mammary gland HMEC 120 19 3158 217 11 232 209 ASAM,HSPA8
SE_02_020900114 chr11:123111809-123240050 Sample_02_0209 Lung MRC-5_MRC5_1DPT 114 25 4007 221 16 257 209 ASAM,HSPA8
SE_02_026400846 chr11:123116917-123146542 Sample_02_0264 Skeletal muscle 7250-empty 846 5 989 109 3 42 0 ASAM
SE_02_041900947 chr11:123118220-123146178 Sample_02_0419 Pectoralis major muscle LHCN-M2_nodox 947 11 934 105 3 42 0 ASAM
SE_00_000400193 chr11:123122415-123160718 Sample_00_0004 Aorta aorta 193 14 1260 148 6 62 0 ASAM
SE_02_011100235 chr11:123144319-123196446 Sample_02_0111 Ovaries IOE4 235 6 1585 99 4 155 209 ASAM
SE_02_005700209 chr11:123157723-123199281 Sample_02_0057 Mammary gland vHMEC 209 8 1244 49 2 143 209 ASAM
SE_01_008300232 chr11:123158033-123240838 Sample_01_0083 Sigmoid colon sigmoid-colon 232 14 2513 58 10 195 209 ASAM
SE_01_007700262 chr11:123158068-123236252 Sample_01_0077 Gastroesophageal sphincter gastroesophageal-sphincter 262 14 2365 57 10 190 209 ASAM
SE_01_007400255 chr11:123158130-123236445 Sample_01_0074 Esophagus muscularis mucosa esophagus-muscularis-mucosa 255 11 2364 57 10 190 209 ASAM
SE_02_026400167 chr11:123160464-123198889 Sample_02_0264 Skeletal muscle 7250-empty 167 6 1142 45 1 130 209 ASAM
SE_02_010700151 chr11:123160465-123236798 Sample_02_0107 Endometrium EEC16 151 8 2302 55 9 177 209 ASAM
SE_02_005400796 chr11:123160712-123198606 Sample_02_0054 Lung IMR-90_DMSO_1 796 6 1114 44 1 130 209 ASAM
SE_02_026500232 chr11:123161558-123240506 Sample_02_0265 Skeletal muscle 7250-PAX3-FOXO1 232 12 2384 56 9 182 209 ASAM
SE_02_026300336 chr11:123161679-123198618 Sample_02_0263 Osteoblastic hFOB_undifferentiated 336 7 1083 44 1 130 209 ASAM
SE_00_001500064 chr11:123162713-123203561 Sample_00_0015 Lung IMR-90 64 5 1224 49 1 138 209 ASAM
SE_02_003800403 chr11:123162793-123196827 Sample_02_0038 Embryo DE 403 7 995 41 1 126 209 ASAM
SE_02_026200208 chr11:123164077-123203371 Sample_02_0262 Osteoblastic hFOB_JQ1_differentiated 208 6 1190 49 1 136 209 ASAM
SE_01_002900133 chr11:123164393-123198591 Sample_01_0029 Lung fibroblast-of-lung 133 4 1010 43 1 124 209 ASAM
SE_02_021100303 chr11:123164449-123203907 Sample_02_0211 Lung MRC-5_NFD_1DPT 303 9 1193 49 1 137 209 ASAM
SE_01_007800795 chr11:123164858-123210521 Sample_01_0078 Heart left ventricle heart-left-ventricle 795 8 1387 50 4 149 209 ASAM
SE_02_024300287 chr11:123165134-123203315 Sample_02_0243 Foreskin foreskin_HFFs 287 7 1153 48 1 134 209 ASAM
SE_01_009100653 chr11:123165135-123207889 Sample_01_0091 Uterus uterus 653 6 1294 50 4 147 209 ASAM
SE_02_021000291 chr11:123165168-123203155 Sample_02_0210 Lung MRC-5_N_1DPT 291 6 1150 48 1 132 209 ASAM
SE_01_008900297 chr11:123165191-123236492 Sample_01_0089 Transverse colon transverse-colon 297 13 2153 54 9 169 209 ASAM
SE_02_028200221 chr11:123165215-123198618 Sample_02_0282 Lung IMR-90 221 5 985 43 1 122 209 ASAM
SE_02_005500866 chr11:123165290-123198675 Sample_02_0055 Lung IMR-90_Nutlin-3a 866 4 985 43 1 122 209 ASAM
SE_02_027400456 chr11:123165419-123198642 Sample_02_0274 Endometriosis hTERT_KD 456 6 977 43 1 122 209 ASAM
SE_02_008800556 chr11:123165449-123189512 Sample_02_0088 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_0 556 5 702 23 1 76 0 ASAM
SE_02_017300321 chr11:123165513-123240759 Sample_02_0173 Lung IMR-90_senescent 321 16 2279 55 9 174 209 ASAM
SE_02_009100362 chr11:123165564-123189518 Sample_02_0091 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_0 362 4 699 23 1 76 0 ASAM
SE_02_003900538 chr11:123165630-123232277 Sample_02_0039 Embryo AFG 538 12 2031 54 9 152 209 ASAM
SE_02_009200372 chr11:123165863-123188845 Sample_02_0092 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_3 372 6 674 23 1 75 0 ASAM
SE_02_017500567 chr11:123165987-123198550 Sample_02_0175 Lung IMR-90_Etoposide 567 13 963 43 1 118 209 ASAM
SE_02_003601603 chr11:123166112-123196548 Sample_02_0036 Embryo H7 1603 6 898 40 1 118 209 ASAM
SE_01_006600386 chr11:123166112-123198690 Sample_01_0066 Smooth muscle smooth-muscle-cell 386 5 964 43 1 118 209 ASAM
SE_02_004300621 chr11:123166152-123171613 Sample_02_0043 Embryo endodermal CyT49_ES_D2 621 3 164 6 1 22 0 ASAM
SE_02_039900236 chr11:123166286-123196442 Sample_02_0399 Mammary gland SUM159PT-BT-474 236 5 891 40 1 117 209 ASAM
SE_02_026100479 chr11:123172163-123199052 Sample_02_0261 Osteoblastic hFOB_differentiated 479 3 805 39 0 95 209 ASAM
SE_02_040200406 chr11:123172385-123198630 Sample_02_0402 Mammary gland SUM159PT-ZR-75-1 406 6 780 37 0 95 209 ASAM
SE_02_011200374 chr11:123172478-123198876 Sample_02_0112 Connective tissue HT1080_untreated 374 4 790 38 0 95 209 ASAM
SE_02_028000446 chr11:123172486-123198939 Sample_02_0280 Mammary gland SUM159_DMSO_24h 446 5 792 38 0 95 209 ASAM
SE_01_001800706 chr11:123172620-123218679 Sample_01_0018 Submandibular Salivary Gland ACC112 706 6 1398 44 3 121 209 ASAM
SE_02_009300169 chr11:123172639-123198716 Sample_02_0093 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_6 169 8 777 37 0 95 209 ASAM
SE_02_011300192 chr11:123172647-123198675 Sample_02_0113 Connective tissue HT1080_DOX5d 192 3 775 37 0 95 209 ASAM
SE_02_008400289 chr11:123172819-123197102 Sample_02_0084 Oral cavity KB_5Z-7-oxozeaenol 289 3 727 33 0 95 209 ASAM
SE_02_041900714 chr11:123172836-123219887 Sample_02_0419 Pectoralis major muscle LHCN-M2_nodox 714 10 1414 43 3 119 209 ASAM
SE_02_001000915 chr11:123172897-123198600 Sample_02_0010 Kidney A-498_emptyvector 915 8 761 35 0 93 209 ASAM
SE_02_007600372 chr11:123172976-123204273 Sample_02_0076 Autonomic ganglia SH-SY5Y_DMSO_3h 372 6 951 41 1 107 209 ASAM
SE_00_000400456 chr11:123175490-123195948 Sample_00_0004 Aorta aorta 456 9 612 28 0 87 209 ASAM
SE_02_001900840 chr11:123184766-123207467 Sample_02_0019 Embryo Neural crest cells 840 5 718 27 2 91 209 ASAM
SE_00_002401214 chr11:123187763-123196834 Sample_00_0024 Embryo mesendoderm 1214 2 275 17 0 49 209 ASAM
SE_02_021000217 chr11:123217864-123268482 Sample_02_0210 Lung MRC-5_N_1DPT 217 14 1484 13 10 81 0 ASAM
SE_02_021101139 chr11:123247736-123268846 Sample_02_0211 Lung MRC-5_NFD_1DPT 1139 8 592 9 5 52 0 ASAM
SE_02_029700020 chr11:123300891-123412910 Sample_02_0297 Neuroblastoma CLB-CAR 20 9 3424 56 25 233 66 ASAM
Genomic distribution of SEs associated with ASAM
Genome Browser

The strength of the tissue affected by the gene

Expression of ASAM

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)