General Details

Super-enhancer:SE_00_02600348
Genomic Locus: chr7: 93976436-94006263
Size/Length:29827bp
Conservation:0.0652327
BioSample Type:Tissue
Tissue Type:Muscle of trunk
Sample Name:muscle-of-trunk
Source:Roadmap
Element:5
Rank:348
ChIP Density(Case):18591.1691
ChIP Density(Input):2562.1393

Super-enhancer Associated Network


* The complex regulatory networks formed by this SE , SE associated genes , TFs binding to the SE and their upstream pathways can be interactively visualized.


Fimo:
SE-Gene Linking Strategies:
Pathway Enriciment Threshold:
Top Pathway:
 



Super-enhancer Associated Statistics

Associated Gene Details

ROSE Overlap:.
ROSE Proximal:COL1A2
ROSE Closest:COL1A2
The Closest Active:COL1A2

Factors Binding to Super-enhancer




Using these SE element regions to analyze by online tools GREAT *The TFs binding to this SE identified by ChIP-seq.

Chrome Element_Start Element_End TF TF Source TF_Start TF_End TF Class Master TF

Using these SE element regions to analyze by online tools GREAT * The TFs binding to this SE predicted by Motif.

Chrome Element_Start Element_End TF Database TF_Start TF_End Score P_Value TF Class Master TF
chr7 93977531 93978848 ALX4 Transfac.V$ALX4_02 93978396 93978412 16.83000 7.15e-07 Helix-turn-helix domains N
chr7 93977531 93978848 ALX4 Transfac.V$ALX4_03 93978396 93978412 16.85540 7.11e-07 Helix-turn-helix domains N
chr7 93977531 93978848 ALX4 Homeodomain.UP00187_1 93978396 93978412 16.78790 7.74e-07 Helix-turn-helix domains N
chr7 93977531 93978848 ALX4 Uniprobe.UP00187_1 93978396 93978412 16.78790 7.74e-07 Helix-turn-helix domains N
chr7 93984450 93985524 ELF3 Transfac.V$ELF4_04 93984660 93984676 14.29050 5.56e-07 Helix-turn-helix domains N
chr7 93995788 93999195 ELF3 Transfac.V$ELF4_04 93997052 93997068 14.64250 3.27e-07 Helix-turn-helix domains N
chr7 94002770 94006263 ELF3 Transfac.V$ELF4_04 94005332 94005348 14.25700 5.83e-07 Helix-turn-helix domains N
chr7 93977531 93978848 ELF3 Transfac.V$ELF4_04 93977631 93977647 14.16200 6.7e-07 Helix-turn-helix domains N
chr7 93984450 93985524 ELF3 Uniprobe.UP00407_2 93984660 93984676 14.26260 5.38e-07 Helix-turn-helix domains N
chr7 93995788 93999195 ELF3 Uniprobe.UP00407_2 93997052 93997068 14.65920 2.95e-07 Helix-turn-helix domains N
chr7 94002770 94006263 ELF3 Uniprobe.UP00407_2 94005332 94005348 14.27930 5.25e-07 Helix-turn-helix domains N
chr7 93977531 93978848 ELF3 Uniprobe.UP00407_2 93977631 93977647 14.03350 7.51e-07 Helix-turn-helix domains N
chr7 93977531 93978848 ELF5 Transfac.V$ELF5_01 93978126 93978136 14.48890 8.43e-07 Helix-turn-helix domains N
chr7 93984450 93985524 FOXA2 Uniprobe.UP00073_1 93985286 93985302 16.66360 9.77e-07 Helix-turn-helix domains N
chr7 94002770 94006263 FOXG1 Transfac.V$FOXG1_03 94006210 94006226 5.38182 9.19e-07 Helix-turn-helix domains N
chr7 93995788 93999195 FOXJ2 Transfac.V$FOXJ2_01 93996504 93996521 18.48890 5.43e-08 Helix-turn-helix domains N
chr7 93995788 93999195 FOXJ2 Transfac.V$FOXJ2_03 93996503 93996516 18.03330 4.35e-07 Helix-turn-helix domains N
chr7 93995788 93999195 FOXJ2 Jolma2013.FOXJ2_DBD 93996503 93996516 18.23230 3.84e-07 Helix-turn-helix domains N
chr7 93984450 93985524 FOXJ3 Transfac.V$FOXJ3_08 93985291 93985304 17.54550 4.52e-07 Helix-turn-helix domains N
chr7 93995788 93999195 FOXJ3 Transfac.V$FOXJ3_08 93996503 93996516 20.84850 6.65e-08 Helix-turn-helix domains N
chr7 93995788 93999195 FOXJ3 Transfac.V$FOXJ3_11 93996503 93996516 18.88800 1.96e-07 Helix-turn-helix domains N
chr7 93984450 93985524 FOXJ3 Jolma2013.FOXJ3_DBD_2 93985291 93985304 17.56000 4.58e-07 Helix-turn-helix domains N
chr7 93995788 93999195 FOXJ3 Jolma2013.FOXJ3_DBD_2 93996503 93996516 20.85000 6.33e-08 Helix-turn-helix domains N
chr7 93995788 93999195 FOXJ3 Jolma2013.Foxj3_DBD_2 93996503 93996516 18.88000 1.96e-07 Helix-turn-helix domains N
chr7 94002770 94006263 FOXK1 Transfac.V$FOXK1_04 94005346 94005360 16.14690 2.48e-07 Helix-turn-helix domains N
chr7 94002770 94006263 FOXK1 Uniprobe.UP00025_2 94005346 94005360 16.11890 2.36e-07 Helix-turn-helix domains N
chr7 94002770 94006263 FOXL1 Transfac.V$FOXL1_02 94005341 94005356 16.80690 8.33e-08 Helix-turn-helix domains N
chr7 94002770 94006263 FOXL1 Transfac.V$FOXL1_02 94005561 94005576 15.22760 9.02e-07 Helix-turn-helix domains N
chr7 94002770 94006263 FOXL1 Transfac.V$FOXL1_02 94005566 94005581 15.22760 9.02e-07 Helix-turn-helix domains N
chr7 94002770 94006263 FOXL1 Uniprobe.UP00061_2 94005341 94005356 16.76550 8.28e-08 Helix-turn-helix domains N
chr7 94002770 94006263 FOXL1 Uniprobe.UP00061_2 94005561 94005576 15.22070 8.59e-07 Helix-turn-helix domains N
chr7 94002770 94006263 FOXL1 Uniprobe.UP00061_2 94005566 94005581 15.22070 8.59e-07 Helix-turn-helix domains N
chr7 93984450 93985524 FOXO1 Transfac.V$FOXO1_04 93985228 93985247 5.90789 7.78e-08 Helix-turn-helix domains N
chr7 93984450 93985524 FOXP1 Transfac.V$FOXP1_01 93984650 93984669 5.19277 4.84e-07 Helix-turn-helix domains N
chr7 93984450 93985524 FOXP1 Transfac.V$FOXP1_01 93984651 93984670 5.19277 4.84e-07 Helix-turn-helix domains N
chr7 93984450 93985524 FOXP1 Transfac.V$FOXP1_01 93984652 93984671 5.19277 4.84e-07 Helix-turn-helix domains N
chr7 93984450 93985524 FOXP1 Transfac.V$FOXP1_01 93984653 93984672 5.19277 4.84e-07 Helix-turn-helix domains N
chr7 93984450 93985524 FOXP1 Transfac.V$FOXP1_01 93984654 93984673 5.19277 4.84e-07 Helix-turn-helix domains N
chr7 93995788 93999195 FOXP1 Transfac.V$FOXP1_01 93996654 93996673 15.38550 2.81e-08 Helix-turn-helix domains N
chr7 93995788 93999195 FOXP1 Transfac.V$FOXP1_01 93996658 93996677 2.62651 9.56e-07 Helix-turn-helix domains N
chr7 94002770 94006263 FOXP1 Transfac.V$FOXP1_01 94005339 94005358 4.12048 6.2e-07 Helix-turn-helix domains N
chr7 94002770 94006263 FOXP1 Transfac.V$FOXP1_01 94005342 94005361 4.16867 6.11e-07 Helix-turn-helix domains N
chr7 94002770 94006263 FOXP1 Transfac.V$FOXP1_01 94005345 94005364 3.77108 6.79e-07 Helix-turn-helix domains N
chr7 94002770 94006263 FOXP1 Transfac.V$FOXP1_01 94005357 94005376 5.19277 4.84e-07 Helix-turn-helix domains N
chr7 94002770 94006263 FOXP1 Transfac.V$FOXP1_01 94005463 94005482 7.15663 3.34e-07 Helix-turn-helix domains N
chr7 93984450 93985524 FOXP1 JASPAR2014.MA0481.1 93985288 93985302 19.71830 1.71e-08 Helix-turn-helix domains N
chr7 93984450 93985524 GSX2 Transfac.V$GSH2_01 93984753 93984768 16.65000 5.49e-07 Helix-turn-helix domains N
chr7 93984450 93985524 GSX2 Homeodomain.UP00127_1 93984753 93984768 16.58560 5.39e-07 Helix-turn-helix domains N
chr7 93984450 93985524 GSX2 Uniprobe.UP00127_1 93984753 93984768 16.58560 5.39e-07 Helix-turn-helix domains N
chr7 94002770 94006263 HMGA1 Transfac.V$HMGIY_Q3 94005897 94005911 13.92000 5.81e-07 beta-Sheet binding to DNA N
chr7 93995788 93999195 HOXB5 Transfac.V$HOXB5_03 93998620 93998629 10.83870 7.63e-07 Helix-turn-helix domains N
chr7 93995788 93999195 HOXB5 Jolma2013.HOXB5_DBD 93998620 93998629 10.80810 7.63e-07 Helix-turn-helix domains N
chr7 93984450 93985524 HOXC10 Transfac.V$HOXC10_03 93985298 93985307 14.03640 8.71e-07 Helix-turn-helix domains N
chr7 93984450 93985524 HOXC10 Jolma2013.HOXC10_DBD 93985298 93985307 14.00000 8.71e-07 Helix-turn-helix domains N
chr7 93995788 93999195 HSF1 Transfac.V$HSF1_02 93998215 93998227 19.88710 2.74e-07 Helix-turn-helix domains N
chr7 93995788 93999195 HSF1 Transfac.V$HSF1_Q6_01 93998215 93998228 16.55560 3.82e-08 Helix-turn-helix domains N
chr7 93995788 93999195 HSF1 Jolma2013.HSF1_DBD 93998215 93998227 17.84000 2.61e-07 Helix-turn-helix domains N
chr7 93995788 93999195 HSF1 Jolma2013.HSF1_full 93998215 93998227 19.82830 2.74e-07 Helix-turn-helix domains N
chr7 93995788 93999195 HSF2 Transfac.V$HSF2_02 93998215 93998227 19.09640 2.85e-07 Helix-turn-helix domains N
chr7 93995788 93999195 HSF2 Transfac.V$HSF2_04 93998215 93998227 19.21820 2.6e-07 Helix-turn-helix domains N
chr7 93995788 93999195 HSF2 Jolma2013.HSF2_DBD 93998215 93998227 19.18000 2.6e-07 Helix-turn-helix domains N
chr7 93995788 93999195 HSF4 Transfac.V$HSF4_01 93998215 93998227 18.03610 2.73e-07 Helix-turn-helix domains N
chr7 93995788 93999195 HSF4 Jolma2013.HSF4_DBD 93998215 93998227 17.99000 2.73e-07 Helix-turn-helix domains N
chr7 93984450 93985524 IRF1 JASPAR2014.MA0050.2 93985404 93985424 19.01610 2.53e-07 Helix-turn-helix domains N
chr7 94002770 94006263 IRF1 JASPAR2014.MA0050.2 94005363 94005383 17.53230 7.24e-07 Helix-turn-helix domains N
chr7 94002770 94006263 IRF1 JASPAR2014.MA0050.2 94005445 94005465 17.35480 8.14e-07 Helix-turn-helix domains N
chr7 93976436 93977284 IRF5 Transfac.V$IRF5_Q3 93977151 93977163 18.50810 6.42e-07 Helix-turn-helix domains N
chr7 94002770 94006263 IRF5 Transfac.V$IRF5_Q3 94005454 94005466 18.57260 5.36e-07 Helix-turn-helix domains N
chr7 93995788 93999195 IRX2 Transfac.V$IRX2_01 93996697 93996713 17.18000 6.49e-07 Helix-turn-helix domains N
chr7 93995788 93999195 IRX2 Homeodomain.UP00236_1 93996697 93996713 17.14410 6.72e-07 Helix-turn-helix domains N
chr7 93995788 93999195 IRX2 Uniprobe.UP00236_1 93996697 93996713 17.14410 6.72e-07 Helix-turn-helix domains N
chr7 93995788 93999195 IRX3 Homeodomain.UP00223_2 93996697 93996713 17.35140 3.87e-07 Helix-turn-helix domains N
chr7 93995788 93999195 IRX3 Uniprobe.UP00223_2 93996697 93996713 17.35140 3.87e-07 Helix-turn-helix domains N
chr7 93995788 93999195 IRX5 Transfac.V$IRX5_01 93996697 93996713 17.28000 2.18e-07 Helix-turn-helix domains N
chr7 93995788 93999195 IRX5 Homeodomain.UP00250_1 93996697 93996713 17.32430 2.13e-07 Helix-turn-helix domains N
chr7 93995788 93999195 IRX5 Uniprobe.UP00250_1 93996697 93996713 17.32430 2.13e-07 Helix-turn-helix domains N
chr7 93995788 93999195 IRX6 Transfac.V$IRX3_01 93996697 93996713 17.36000 3.99e-07 Helix-turn-helix domains N
chr7 93977531 93978848 LHX9 Transfac.V$LHX9_01 93978396 93978412 17.40000 3.49e-07 Helix-turn-helix domains N
chr7 93977531 93978848 LHX9 Homeodomain.UP00175_1 93978396 93978412 17.32000 3.95e-07 Helix-turn-helix domains N
chr7 93977531 93978848 LHX9 Uniprobe.UP00175_1 93978396 93978412 17.32000 3.95e-07 Helix-turn-helix domains N
chr7 93995788 93999195 MAF Transfac.V$CMAF_Q5 93998570 93998580 14.29700 2.43e-07 Basic domains N
chr7 94002770 94006263 MAFK Transfac.V$MAFK_04 94005896 94005910 16.41100 5.11e-07 Basic domains N
chr7 93995788 93999195 MAFK Transfac.V$MAFK_05 93998574 93998585 16.09620 4.35e-07 Basic domains N
chr7 93995788 93999195 MAFK Jolma2013.MAFK_DBD 93998574 93998585 15.29290 8.76e-07 Basic domains N
chr7 93995788 93999195 MAFK Jolma2013.MAFK_full 93998574 93998585 16.04000 4.35e-07 Basic domains N
chr7 94002770 94006263 MAFK Uniprobe.UP00044_2 94005896 94005910 16.36300 5.11e-07 Basic domains N
chr7 93995788 93999195 MEF2A Transfac.V$MEF2A_03 93996886 93996897 18.80650 4.67e-07 alpha-Helices exposed by beta-structures N
chr7 93995788 93999195 MEF2A JASPAR2014.MA0052.2 93996885 93996899 18.38710 3.06e-07 alpha-Helices exposed by beta-structures N
chr7 93995788 93999195 MEF2A Jolma2013.MEF2A_DBD 93996886 93996897 18.74750 4.67e-07 alpha-Helices exposed by beta-structures N
chr7 93995788 93999195 MEF2B Transfac.V$MEF2B_01 93996886 93996897 19.40000 4.17e-07 alpha-Helices exposed by beta-structures N
chr7 93995788 93999195 MEF2B Jolma2013.MEF2B_full 93996886 93996897 19.34340 4.17e-07 alpha-Helices exposed by beta-structures N
chr7 93995788 93999195 MEF2C JASPAR2014.MA0497.1 93996884 93996898 18.29310 2.24e-07 alpha-Helices exposed by beta-structures Y
chr7 94002770 94006263 MEF2C JASPAR2014.MA0497.1 94002860 94002874 17.10340 7.91e-07 alpha-Helices exposed by beta-structures Y
chr7 93995788 93999195 MEF2D Transfac.V$MEF2D_01 93996886 93996897 20.36360 9.97e-08 alpha-Helices exposed by beta-structures N
chr7 93995788 93999195 MEF2D Jolma2013.MEF2D_DBD 93996886 93996897 20.31310 9.97e-08 alpha-Helices exposed by beta-structures N
chr7 93977531 93978848 MSX1 Transfac.V$MSX1_02 93978398 93978413 16.11110 5.53e-07 Helix-turn-helix domains N
chr7 93977531 93978848 MSX1 Homeodomain.UP00234_1 93978398 93978413 16.05050 5.97e-07 Helix-turn-helix domains N
chr7 93977531 93978848 MSX1 Uniprobe.UP00234_1 93978398 93978413 16.05050 5.97e-07 Helix-turn-helix domains N
chr7 93995788 93999195 MYEF2 Transfac.V$MEF2_04 93996880 93996901 13.54220 6.26e-07 alpha-Helices exposed by beta-structures N
chr7 93995788 93999195 MYEF2 Transfac.V$MEF2_Q6_01 93997223 93997234 17.23230 5.71e-07 alpha-Helices exposed by beta-structures N
chr7 94002770 94006263 NANOG Transfac.V$NANOG_02 94005336 94005355 15.65150 8.26e-07 Helix-turn-helix domains N
chr7 94002770 94006263 NANOG Transfac.V$NANOG_02 94005365 94005384 15.92420 5.79e-07 Helix-turn-helix domains N
chr7 93995788 93999195 NKX2-2 Transfac.V$NKX22_02 93999047 93999063 19.44440 2.55e-08 Helix-turn-helix domains N
chr7 93995788 93999195 NKX2-2 Homeodomain.UP00231_1 93999047 93999063 19.43430 2.51e-08 Helix-turn-helix domains N
chr7 93995788 93999195 NKX2-2 Uniprobe.UP00231_1 93999047 93999063 19.43430 2.51e-08 Helix-turn-helix domains N
chr7 94002770 94006263 NKX3-1 Transfac.V$NKX3A_01 94002918 94002929 16.46460 7.8e-07 Helix-turn-helix domains N
chr7 94002770 94006263 NKX6-1 Transfac.V$NKX61_01 94003344 94003356 18.20200 3.94e-07 Helix-turn-helix domains N
chr7 93995788 93999195 NKX6-3 Transfac.V$NKX63_01 93998616 93998632 16.27000 9.49e-07 Helix-turn-helix domains N
chr7 93995788 93999195 NKX6-3 Homeodomain.UP00238_1 93998616 93998632 16.27930 9.61e-07 Helix-turn-helix domains N
chr7 93995788 93999195 NKX6-3 Uniprobe.UP00238_1 93998616 93998632 16.27930 9.61e-07 Helix-turn-helix domains N
chr7 93995788 93999195 NR3C1 Transfac.V$NR3C1_01 93997977 93997994 20.04460 2.19e-08 Zinc-coordinating DNA-binding domains N
chr7 93995788 93999195 NR5A2 JASPAR2014.MA0505.1 93996813 93996827 17.75860 4.65e-07 Zinc-coordinating DNA-binding domains N
chr7 94002770 94006263 OSR2 Transfac.V$OSR2_04 94004099 94004114 15.17010 2.9e-07 Zinc-coordinating DNA-binding domains N
chr7 94002770 94006263 OSR2 Uniprobe.UP00052_2 94004099 94004114 15.13700 2.73e-07 Zinc-coordinating DNA-binding domains N
chr7 93977531 93978848 PAX4 JASPAR2014.MA0068.1 93978697 93978726 15.96000 8.51e-07 Helix-turn-helix domains N
chr7 93995788 93999195 PITX2 Transfac.V$PITX2_Q2 93996794 93996804 16.09090 8.91e-07 Helix-turn-helix domains N
chr7 94002770 94006263 PITX2 Transfac.V$PITX2_Q2 94005834 94005844 16.56360 4.36e-07 Helix-turn-helix domains N
chr7 93995788 93999195 PITX2 Transfac.V$PITX2_Q6 93996794 93996803 15.07070 9.1e-07 Helix-turn-helix domains N
chr7 94002770 94006263 PITX2 Transfac.V$PITX2_Q6 94005835 94005844 15.07070 9.1e-07 Helix-turn-helix domains N
chr7 93995788 93999195 POLR3A Transfac.V$RPC155_01 93996839 93996854 20.30400 5.58e-08 ENCODE_TF N
chr7 94002770 94006263 POLR3A Transfac.V$RPC155_01 94005782 94005797 20.40800 5.12e-08 ENCODE_TF N
chr7 93984450 93985524 POU1F1 Transfac.V$POU1F1_03 93984895 93984911 15.93710 8.05e-07 Helix-turn-helix domains N
chr7 93984450 93985524 POU1F1 Jolma2013.POU1F1_DBD 93984895 93984911 15.87410 8.06e-07 Helix-turn-helix domains N
chr7 93984450 93985524 POU3F1 Transfac.V$POU3F1_03 93984897 93984908 15.19190 9.36e-07 Helix-turn-helix domains N
chr7 93984450 93985524 POU3F1 Jolma2013.POU3F1_DBD_2 93984897 93984908 15.15320 8.89e-07 Helix-turn-helix domains N
chr7 93984450 93985524 POU3F2 Transfac.V$POU3F2_04 93984897 93984909 16.48390 3.06e-07 Helix-turn-helix domains N
chr7 93984450 93985524 POU3F2 Jolma2013.POU3F2_DBD 93984897 93984909 16.42420 3.06e-07 Helix-turn-helix domains N
chr7 93984450 93985524 POU3F3 Transfac.V$OCTAMER_01 93984897 93984913 18.08080 2.92e-07 Helix-turn-helix domains N
chr7 93984450 93985524 POU3F3 Transfac.V$POU3F3_01 93984897 93984913 18.13250 2.91e-07 Helix-turn-helix domains N
chr7 93984450 93985524 POU3F3 Transfac.V$POU3F3_03 93984897 93984908 15.76580 7.85e-07 Helix-turn-helix domains N
chr7 93977531 93978848 POU3F3 Transfac.V$POU3F3_04 93978731 93978742 14.01360 7.89e-07 Helix-turn-helix domains N
chr7 93984450 93985524 POU3F3 Homeodomain.UP00211_1 93984897 93984913 18.06310 2.97e-07 Helix-turn-helix domains N
chr7 93984450 93985524 POU3F3 Jolma2013.POU3F3_DBD_2 93984897 93984908 15.71200 7.85e-07 Helix-turn-helix domains N
chr7 93977531 93978848 POU3F3 Jolma2013.POU3F3_DBD_3 93978731 93978742 13.97960 7.89e-07 Helix-turn-helix domains N
chr7 93984450 93985524 POU3F3 Uniprobe.UP00211_1 93984897 93984913 18.06310 2.97e-07 Helix-turn-helix domains N
chr7 93984450 93985524 PRDM1 Transfac.V$PRDM1_02 93984537 93984551 17.98800 5.23e-07 Zinc-coordinating DNA-binding domains N
chr7 93984450 93985524 PRDM1 JASPAR2014.MA0508.1 93984537 93984551 18.23640 3.3e-07 Zinc-coordinating DNA-binding domains N
chr7 93984450 93985524 PRDM1 Jolma2013.PRDM1_full 93984537 93984551 18.00000 5.09e-07 Zinc-coordinating DNA-binding domains N
chr7 93995788 93999195 RXRA Transfac.V$RXRA_06 93996268 93996281 16.84680 9.62e-07 Zinc-coordinating DNA-binding domains N
chr7 93995788 93999195 RXRA Jolma2013.RXRA_full_2 93996268 93996281 16.94590 9.35e-07 Zinc-coordinating DNA-binding domains N
chr7 93984450 93985524 SLC20A1 Transfac.V$PIT1_Q6 93984466 93984483 16.49000 9.09e-07 UNKNOW N
chr7 94002770 94006263 SMAD1 Transfac.V$SMAD1_01 94004808 94004819 15.06360 4.92e-07 beta-Hairpin exposed by an alpha/beta-scaffold Y
chr7 93984450 93985524 SOX15 Transfac.V$SOX15_03 93985437 93985453 16.20280 3.33e-07 Other all-alpha-helical DNA-binding domains N
chr7 93984450 93985524 SOX15 Uniprobe.UP00075_1 93985437 93985453 16.22400 3.32e-07 Other all-alpha-helical DNA-binding domains N
chr7 93984450 93985524 SOX17 Uniprobe.UP00014_1 93985437 93985451 17.03200 1.29e-07 Other all-alpha-helical DNA-binding domains N
chr7 93995788 93999195 SOX21 Transfac.V$SOX21_06 93997699 93997714 15.69350 7.72e-07 Other all-alpha-helical DNA-binding domains N
chr7 94002770 94006263 SOX3 JASPAR2014.MA0514.1 94004809 94004818 16.17240 8.71e-07 Other all-alpha-helical DNA-binding domains N
chr7 94002770 94006263 SOX30 Transfac.V$SOX30_03 94002877 94002892 16.38550 1.02e-07 Other all-alpha-helical DNA-binding domains N
chr7 93977531 93978848 SOX30 Transfac.V$SOX30_03 93978068 93978083 15.20480 9.6e-07 Other all-alpha-helical DNA-binding domains N
chr7 93995788 93999195 SOX30 Transfac.V$SOX40_04 93998969 93998984 16.42110 3.97e-07 Other all-alpha-helical DNA-binding domains N
chr7 94002770 94006263 SOX30 Uniprobe.UP00023_1 94002877 94002892 16.24800 1.15e-07 Other all-alpha-helical DNA-binding domains N
chr7 93995788 93999195 SOX30 Uniprobe.UP00023_2 93998969 93998984 16.45610 3.91e-07 Other all-alpha-helical DNA-binding domains N
chr7 93984450 93985524 SOX5 Uniprobe.UP00091_1 93985438 93985453 16.16000 8.17e-07 Other all-alpha-helical DNA-binding domains N
chr7 94002770 94006263 SOX9 Transfac.V$SOX9_B1 94002877 94002890 16.26510 1.17e-07 Other all-alpha-helical DNA-binding domains N
chr7 93977531 93978848 SOX9 Transfac.V$SOX9_B1 93978068 93978081 16.36140 8.63e-08 Other all-alpha-helical DNA-binding domains N
chr7 93984450 93985524 SRF Transfac.V$SRF_06 93984659 93984675 16.09090 2.2e-08 alpha-Helices exposed by beta-structures N
chr7 93984450 93985524 SRF Transfac.V$SRF_06 93984660 93984676 15.72730 4.7e-08 alpha-Helices exposed by beta-structures N
chr7 93995788 93999195 SRF Transfac.V$SRF_06 93996653 93996669 14.46590 4.3e-07 alpha-Helices exposed by beta-structures N
chr7 93995788 93999195 SRF Transfac.V$SRF_06 93996893 93996909 14.67050 3.09e-07 alpha-Helices exposed by beta-structures N
chr7 93995788 93999195 SRF Transfac.V$SRF_06 93997055 93997071 13.89200 9.97e-07 alpha-Helices exposed by beta-structures N
chr7 94002770 94006263 SRF Transfac.V$SRF_06 94005332 94005348 16.27840 1.4e-08 alpha-Helices exposed by beta-structures N
chr7 94002770 94006263 SRF Transfac.V$SRF_06 94005356 94005372 13.89200 9.97e-07 alpha-Helices exposed by beta-structures N
chr7 93977531 93978848 SRF Transfac.V$SRF_06 93977631 93977647 16.96020 1.9e-09 alpha-Helices exposed by beta-structures N
chr7 93977531 93978848 SRF Transfac.V$SRF_06 93977632 93977648 14.52840 3.89e-07 alpha-Helices exposed by beta-structures N
chr7 93984450 93985524 SRF Uniprobe.UP00077_2 93984659 93984675 15.98310 2.34e-08 alpha-Helices exposed by beta-structures N
chr7 93984450 93985524 SRF Uniprobe.UP00077_2 93984660 93984676 15.58190 5.5e-08 alpha-Helices exposed by beta-structures N
chr7 93995788 93999195 SRF Uniprobe.UP00077_2 93996653 93996669 14.32770 4.82e-07 alpha-Helices exposed by beta-structures N
chr7 93995788 93999195 SRF Uniprobe.UP00077_2 93996893 93996909 14.63280 2.97e-07 alpha-Helices exposed by beta-structures N
chr7 94002770 94006263 SRF Uniprobe.UP00077_2 94005332 94005348 16.15250 1.59e-08 alpha-Helices exposed by beta-structures N
chr7 93977531 93978848 SRF Uniprobe.UP00077_2 93977631 93977647 16.92660 1.86e-09 alpha-Helices exposed by beta-structures N
chr7 93977531 93978848 SRF Uniprobe.UP00077_2 93977632 93977648 14.45200 3.98e-07 alpha-Helices exposed by beta-structures N
chr7 93995788 93999195 SRY Transfac.V$SRY_09 93997699 93997714 14.39390 7.84e-07 Other all-alpha-helical DNA-binding domains N
chr7 94002770 94006263 SRY Transfac.V$SRY_09 94004315 94004330 13.75760 9.56e-07 Other all-alpha-helical DNA-binding domains N
chr7 94002770 94006263 TBX19 Transfac.V$TBX19_01 94004934 94004953 19.49400 1.5e-07 Immunoglobulin fold N
chr7 94002770 94006263 TBX19 Transfac.V$TBX19_01 94004934 94004953 19.10840 2.04e-07 Immunoglobulin fold N
chr7 94002770 94006263 TBX19 Jolma2013.TBX19_DBD 94004934 94004953 19.49000 1.48e-07 Immunoglobulin fold N
chr7 94002770 94006263 TBX19 Jolma2013.TBX19_DBD 94004934 94004953 19.10000 2.02e-07 Immunoglobulin fold N
chr7 94002770 94006263 TCF3 Transfac.V$TCF3_05 94005437 94005451 10.76760 1.97e-07 Basic domains N
chr7 94002770 94006263 TCF3 Uniprobe.UP00058_2 94005437 94005451 10.67300 2.18e-07 Basic domains N
chr7 93995788 93999195 VDR Transfac.V$VDR_Q3 93998495 93998509 16.62830 2.3e-07 Zinc-coordinating DNA-binding domains N
chr7 94002770 94006263 ZNF35 Transfac.V$ZFP105_03 94002948 94002962 15.78320 1.8e-07 Zinc-coordinating DNA-binding domains N
chr7 94002770 94006263 ZNF35 Transfac.V$ZFP105_03 94005354 94005368 15.66430 2.34e-07 Zinc-coordinating DNA-binding domains N
chr7 94002770 94006263 ZNF35 Uniprobe.UP00037_1 94002948 94002962 15.71530 1.92e-07 Zinc-coordinating DNA-binding domains N
chr7 94002770 94006263 ZNF35 Uniprobe.UP00037_1 94005354 94005368 15.56250 2.64e-07 Zinc-coordinating DNA-binding domains N

The Upstream Pathways of TFs Binding to SE



TF Pathway ID Pathway Name Source
ELF3 pathway0000658 EGFR1 NetPath
ELF3 pathway0001604 PDGF signaling pathway PANTHER
ELF5 pathway0001604 PDGF signaling pathway PANTHER
FOXA2 pathway0000824 FOXA1 transcription factor network PID
FOXA2 pathway0000825 FOXA2 and FOXA3 transcription factor networks PID
FOXA2 pathway0000996 Hedgehog signaling events mediated by Gli proteins PID
FOXA2 pathway0001834 Regulation of gene expression in beta cells Reactome
FOXA2 pathway0002631 Maturity onset diabetes of the young KEGG
FOXA2 pathway0002740 Hs_Endoderm_Differentiation_WP2853_88152 WikiPathways
FOXA2 pathway0002746 Hs_Dopaminergic_Neurogenesis_WP2855_87239 WikiPathways
FOXA2 pathway0002768 Hs_Heart_Development_WP1591_90186 WikiPathways
FOXA2 pathway0002841 Hs_Ectoderm_Differentiation_WP2858_89329 WikiPathways
FOXG1 pathway0001849 Regulation of nuclear SMAD2/3 signaling PID
FOXG1 pathway0002222 TGF_beta_Receptor NetPath
FOXO1 pathway0000118 AKT phosphorylates targets in the nucleus Reactome
FOXO1 pathway0000176 AndrogenReceptor NetPath
FOXO1 pathway0000178 Angiopoietin receptor Tie2-mediated signaling PID
FOXO1 pathway0000270 BCR NetPath
FOXO1 pathway0000443 Class I PI3K signaling events mediated by Akt PID
FOXO1 pathway0000479 Constitutive Signaling by AKT1 E17K in Cancer Reactome
FOXO1 pathway0000513 CXCR4-mediated signaling events PID
FOXO1 pathway0000658 EGFR1 NetPath
FOXO1 pathway0000827 FoxO family signaling PID
FOXO1 pathway0000842 FSH NetPath
FOXO1 pathway0001112 IL-7 NetPath
FOXO1 pathway0001126 IL3 NetPath
FOXO1 pathway0001131 IL6-mediated signaling events PID
FOXO1 pathway0001132 IL6 NetPath
FOXO1 pathway0001167 Insulin/IGF pathway-protein kinase B signaling cascade PANTHER
FOXO1 pathway0001264 Leptin NetPath
FOXO1 pathway0001322 MAPK6/MAPK4 signaling Reactome
FOXO1 pathway0001460 Negative regulation of gene expression ( Insulin receptor signaling (D. melanogaster) ) INOH
FOXO1 pathway0001461 Negative regulation of gene expression ( Insulin receptor signaling (Mammal) ) INOH
FOXO1 pathway0001655 PI3 kinase pathway PANTHER
FOXO1 pathway0001825 Regulation of Androgen receptor activity PID
FOXO1 pathway0001834 Regulation of gene expression in beta cells Reactome
FOXO1 pathway0001849 Regulation of nuclear SMAD2/3 signaling PID
FOXO1 pathway0002035 Signaling events mediated by HDAC Class III PID
FOXO1 pathway0002222 TGF_beta_Receptor NetPath
FOXO1 pathway0002249 TNFalpha NetPath
FOXO1 pathway0002624 Insulin signaling pathway KEGG
FOXO1 pathway0002656 Pathways in cancer KEGG
FOXO1 pathway0002662 Prostate cancer KEGG
FOXO1 pathway0002690 Hs_ErbB_Signaling_Pathway_WP673_91869 WikiPathways
FOXO1 pathway0002723 Hs_Angiopoietin_Like_Protein_8_Regulatory_Pathway_WP3915_90629 WikiPathways
FOXO1 pathway0002731 Hs_Integrated_Breast_Cancer_Pathway_WP1984_82941 WikiPathways
FOXO1 pathway0002743 Hs_VEGFA-VEGFR2_Signaling_Pathway_WP3888_90000 WikiPathways
FOXO1 pathway0002763 Hs_Rac1-Pak1-p38-MMP-2_pathway_WP3303_87628 WikiPathways
FOXO1 pathway0002773 Hs_Energy_Metabolism_WP1541_91584 WikiPathways
FOXO1 pathway0002808 Hs_Transcription_factor_regulation_in_adipogenesis_WP3599_88581 WikiPathways
FOXO1 pathway0002855 Hs_NAD_metabolism,_sirtuins_and_aging_WP3630_88178 WikiPathways
FOXO1 pathway0002862 Hs_AGE-RAGE_pathway_WP2324_89798 WikiPathways
FOXO1 pathway0002875 Hs_Follicle_Stimulating_Hormone_(FSH)_signaling_pathway_WP2035_86080 WikiPathways
HMGA1 pathway0000020 2-LTR circle formation Reactome
HMGA1 pathway0000195 APOBEC3G mediated resistance to HIV-1 infection Reactome
HMGA1 pathway0000814 Formation of Senescence-Associated Heterochromatin Foci (SAHF) Reactome
HMGA1 pathway0001127 IL4-mediated signaling events PID
HMGA1 pathway0001169 Integration of provirus Reactome
HMGA1 pathway0002390 Validated targets of C-MYC transcriptional activation PID
HMGA1 pathway0002434 Vpr-mediated nuclear import of PICs Reactome
HMGA1 pathway0002793 Hs_Integrin-mediated_Cell_Adhesion_WP185_88160 WikiPathways
HSF1 pathway0000249 Attenuation phase Reactome
HSF1 pathway0001044 HSF1-dependent transactivation Reactome
HSF1 pathway0001045 HSF1 activation Reactome
HSF1 pathway0001582 p73 transcription factor network PID
HSF1 pathway0001839 Regulation of HSF1-mediated heat shock response Reactome
HSF1 pathway0002753 Hs_DNA_IR-Double_Strand_Breaks_(DSBs)_and_cellular_response_via_ATM_WP3959_91367 WikiPathways
HSF2 pathway0002388 Validated nuclear estrogen receptor alpha network PID
IRF1 pathway0000747 Factors involved in megakaryocyte development and platelet production Reactome
IRF1 pathway0000916 Glucocorticoid receptor regulatory network PID
IRF1 pathway0001079 IFN-gamma pathway PID
IRF1 pathway0001117 IL12 signaling mediated by STAT4 PID
IRF1 pathway0001131 IL6-mediated signaling events PID
IRF1 pathway0001180 Interferon alpha/beta signaling Reactome
IRF1 pathway0001181 Interferon gamma signaling Reactome
IRF1 pathway0001861 Regulation of Telomerase PID
IRF1 pathway0002282 TRAF6 mediated IRF7 activation Reactome
IRF1 pathway0002655 Hepatitis C KEGG
IRF1 pathway0002686 Hs_Tryptophan_metabolism_WP465_85055 WikiPathways
IRF5 pathway0000608 Direct p53 effectors PID
IRF5 pathway0001180 Interferon alpha/beta signaling Reactome
IRF5 pathway0001181 Interferon gamma signaling Reactome
IRF5 pathway0002602 Toll-like receptor signaling pathway KEGG
MAF pathway0000187 AP-1 transcription factor network PID
MAF pathway0000335 C-MYB transcription factor network PID
MAF pathway0000343 Calcineurin-regulated NFAT-dependent transcription in lymphocytes PID
MAF pathway0002688 Hs_TYROBP_Causal_Network_WP3945_90843 WikiPathways
MAFK pathway0000747 Factors involved in megakaryocyte development and platelet production Reactome
MEF2A pathway0000393 CDO in myogenesis Reactome
MEF2A pathway0000715 ERK/MAPK targets Reactome
MEF2A pathway0002044 Signaling mediated by p38-alpha and p38-beta PID
MEF2A pathway0002222 TGF_beta_Receptor NetPath
MEF2A pathway0002782 Hs_p38_MAPK_Signaling_Pathway_WP400_72084 WikiPathways
MEF2B pathway0000393 CDO in myogenesis Reactome
MEF2B pathway0001572 p38 MAPK pathway PANTHER
MEF2C pathway0000393 CDO in myogenesis Reactome
MEF2C pathway0000430 Circadian Clock Reactome
MEF2C pathway0000692 ErbB1 downstream signaling PID
MEF2C pathway0000715 ERK/MAPK targets Reactome
MEF2C pathway0001517 Notch NetPath
MEF2C pathway0001560 Oxidative stress response PANTHER
MEF2C pathway0001572 p38 MAPK pathway PANTHER
MEF2C pathway0001849 Regulation of nuclear SMAD2/3 signaling PID
MEF2C pathway0001857 Regulation of retinoblastoma protein PID
MEF2C pathway0002034 Signaling events mediated by HDAC Class II PID
MEF2C pathway0002044 Signaling mediated by p38-alpha and p38-beta PID
MEF2C pathway0002222 TGF_beta_Receptor NetPath
MEF2C pathway0002299 Transcriptional activation of mitochondrial biogenesis Reactome
MEF2C pathway0002340 Trk receptor signaling mediated by the MAPK pathway PID
MEF2C pathway0002562 MAPK signaling pathway KEGG
MEF2C pathway0002725 Hs_Endochondral_Ossification_WP474_87977 WikiPathways
MEF2C pathway0002743 Hs_VEGFA-VEGFR2_Signaling_Pathway_WP3888_90000 WikiPathways
MEF2C pathway0002768 Hs_Heart_Development_WP1591_90186 WikiPathways
MEF2C pathway0002799 Hs_Oxidation_by_Cytochrome_P450_WP43_84102 WikiPathways
MEF2C pathway0002853 Hs_TGF-beta_Signaling_Pathway_WP366_90028 WikiPathways
MEF2D pathway0000393 CDO in myogenesis Reactome
MEF2D pathway0000430 Circadian Clock Reactome
MEF2D pathway0001572 p38 MAPK pathway PANTHER
MEF2D pathway0001935 Role of Calcineurin-dependent NFAT signaling in lymphocytes PID
MEF2D pathway0002035 Signaling events mediated by HDAC Class III PID
MEF2D pathway0002299 Transcriptional activation of mitochondrial biogenesis Reactome
MSX1 pathway0002746 Hs_Dopaminergic_Neurogenesis_WP2855_87239 WikiPathways
MSX1 pathway0002747 Hs_Neural_Crest_Differentiation_WP2064_79263 WikiPathways
NANOG pathway0001701 POU5F1 (OCT4), SOX2, NANOG activate genes related to proliferation Reactome
NANOG pathway0001702 POU5F1 (OCT4), SOX2, NANOG repress genes related to differentiation Reactome
NANOG pathway0002301 Transcriptional regulation of pluripotent stem cells Reactome
NKX2-2 pathway0001834 Regulation of gene expression in beta cells Reactome
NKX2-2 pathway0001836 Regulation of gene expression in endocrine-committed (NEUROG3+) progenitor cells Reactome
NKX2-2 pathway0002631 Maturity onset diabetes of the young KEGG
NKX2-2 pathway0002746 Hs_Dopaminergic_Neurogenesis_WP2855_87239 WikiPathways
NKX3-1 pathway0000492 Coregulation of Androgen receptor activity PID
NKX3-1 pathway0000824 FOXA1 transcription factor network PID
NKX3-1 pathway0002656 Pathways in cancer KEGG
NKX3-1 pathway0002662 Prostate cancer KEGG
NKX6-1 pathway0001834 Regulation of gene expression in beta cells Reactome
NKX6-1 pathway0001835 Regulation of gene expression in early pancreatic precursor cells Reactome
NKX6-1 pathway0002631 Maturity onset diabetes of the young KEGG
NR3C1 pathway0000176 AndrogenReceptor NetPath
NR3C1 pathway0000187 AP-1 transcription factor network PID
NR3C1 pathway0000316 BMAL1:CLOCK,NPAS2 activates circadian gene expression Reactome
NR3C1 pathway0000401 Cellular roles of Anthrax toxin PID
NR3C1 pathway0000825 FOXA2 and FOXA3 transcription factor networks PID
NR3C1 pathway0000916 Glucocorticoid receptor regulatory network PID
NR3C1 pathway0001120 IL2 NetPath
NR3C1 pathway0001534 Nuclear Receptor transcription pathway Reactome
NR3C1 pathway0001744 PTK6 Expression Reactome
NR3C1 pathway0001825 Regulation of Androgen receptor activity PID
NR3C1 pathway0001849 Regulation of nuclear SMAD2/3 signaling PID
NR3C1 pathway0002034 Signaling events mediated by HDAC Class II PID
NR3C1 pathway0002570 Neuroactive ligand-receptor interaction KEGG
NR3C1 pathway0002740 Hs_Endoderm_Differentiation_WP2853_88152 WikiPathways
NR3C1 pathway0002750 Hs_Serotonin_Receptor_4-6-7_and_NR3C_Signaling_WP734_74438 WikiPathways
NR3C1 pathway0002755 Hs_White_fat_cell_differentiation_WP3946_90940 WikiPathways
NR3C1 pathway0002808 Hs_Transcription_factor_regulation_in_adipogenesis_WP3599_88581 WikiPathways
NR3C1 pathway0002812 Hs_Sudden_Infant_Death_Syndrome_(SIDS)_Susceptibility_Pathways_WP706_86078 WikiPathways
NR5A2 pathway0001534 Nuclear Receptor transcription pathway Reactome
NR5A2 pathway0001835 Regulation of gene expression in early pancreatic precursor cells Reactome
NR5A2 pathway0002631 Maturity onset diabetes of the young KEGG
PAX4 pathway0001836 Regulation of gene expression in endocrine-committed (NEUROG3+) progenitor cells Reactome
PAX4 pathway0002631 Maturity onset diabetes of the young KEGG
PITX2 pathway0001848 Regulation of nuclear beta catenin signaling and target gene transcription PID
PITX2 pathway0002591 TGF-beta signaling pathway KEGG
PITX2 pathway0002768 Hs_Heart_Development_WP1591_90186 WikiPathways
PITX2 pathway0002771 Hs_BMP_Signaling_Pathway_in_Eyelid_Development_WP3927_90735 WikiPathways
POLR3A pathway0000532 Cytosolic sensors of pathogen-associated DNA Reactome
POLR3A pathway0001926 RNA Polymerase III Abortive And Retractive Initiation Reactome
POLR3A pathway0001927 RNA Polymerase III Chain Elongation Reactome
POLR3A pathway0001928 RNA Polymerase III Transcription Initiation From Type 1 Promoter Reactome
POLR3A pathway0001929 RNA Polymerase III Transcription Initiation From Type 2 Promoter Reactome
POLR3A pathway0001930 RNA Polymerase III Transcription Initiation From Type 3 Promoter Reactome
POLR3A pathway0001931 RNA Polymerase III Transcription Termination Reactome
POLR3A pathway0002492 Purine metabolism KEGG
POLR3A pathway0002494 Pyrimidine metabolism KEGG
POLR3A pathway0002605 Cytosolic DNA-sensing pathway KEGG
POU1F1 pathway0000916 Glucocorticoid receptor regulatory network PID
PRDM1 pathway0000608 Direct p53 effectors PID
PRDM1 pathway0002714 Hs_Nucleotide-binding_Oligomerization_Domain_(NOD)_pathway_WP1433_86035 WikiPathways
RXRA pathway0000044 a6b1 and a6b4 Integrin signaling PID
RXRA pathway0000061 Activation of anterior HOX genes in hindbrain development during early embryogenesis Reactome
RXRA pathway0000069 Activation of gene expression by SREBF (SREBP) Reactome
RXRA pathway0000316 BMAL1:CLOCK,NPAS2 activates circadian gene expression Reactome
RXRA pathway0000430 Circadian Clock Reactome
RXRA pathway0000664 Endogenous sterols Reactome
RXRA pathway0001126 IL3 NetPath
RXRA pathway0001140 Import of palmitoyl-CoA into the mitochondrial matrix Reactome
RXRA pathway0001534 Nuclear Receptor transcription pathway Reactome
RXRA pathway0001704 PPARA activates gene expression Reactome
RXRA pathway0001815 Recycling of bile acids and salts Reactome
RXRA pathway0001825 Regulation of Androgen receptor activity PID
RXRA pathway0001846 Regulation of lipid metabolism by Peroxisome proliferator-activated receptor alpha (PPARalpha) Reactome
RXRA pathway0001853 Regulation of pyruvate dehydrogenase (PDH) complex Reactome
RXRA pathway0001883 Retinoic acid receptors-mediated signaling PID
RXRA pathway0001940 RORA activates gene expression Reactome
RXRA pathway0001947 RXR and RAR heterodimerization with other nuclear receptor PID
RXRA pathway0002028 Signaling by Retinoic Acid Reactome
RXRA pathway0002153 Synthesis of bile acids and bile salts Reactome
RXRA pathway0002155 Synthesis of bile acids and bile salts via 27-hydroxycholesterol Reactome
RXRA pathway0002156 Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol Reactome
RXRA pathway0002249 TNFalpha NetPath
RXRA pathway0002299 Transcriptional activation of mitochondrial biogenesis Reactome
RXRA pathway0002302 Transcriptional regulation of white adipocyte differentiation Reactome
RXRA pathway0002431 Vitamin D metabolism and pathway PANTHER
RXRA pathway0002460 YAP1- and WWTR1 (TAZ)-stimulated gene expression Reactome
RXRA pathway0002561 PPAR signaling pathway KEGG
RXRA pathway0002628 Adipocytokine signaling pathway KEGG
RXRA pathway0002655 Hepatitis C KEGG
RXRA pathway0002656 Pathways in cancer KEGG
RXRA pathway0002663 Thyroid cancer KEGG
RXRA pathway0002669 Small cell lung cancer KEGG
RXRA pathway0002670 Non-small cell lung cancer KEGG
SMAD1 pathway0000135 ALK1 signaling events PID
SMAD1 pathway0000136 ALK2 signaling events PID
SMAD1 pathway0000317 BMP receptor signaling PID
SMAD1 pathway0000321 BMP signaling pathway ( TGF-beta_BMP Diagram(MolecularVariation) ) INOH
SMAD1 pathway0000323 BMP2 signaling pathway(through Smad) ( TGF-beta_BMP Diagram(MolecularVariation) ) INOH
SMAD1 pathway0000692 ErbB1 downstream signaling PID
SMAD1 pathway0000897 Gene expression of smad6/7 by R-smad:smad4 ( TGF-beta_super_family_signaling_pathway(canonical) ) INOH
SMAD1 pathway0000898 Gene expression of smad7 by R-smad:smad4 ( TGF-beta_super_family_signaling_pathway(canonical) ) INOH
SMAD1 pathway0000994 Hedgehog NetPath
SMAD1 pathway0001279 LIF signaling pathway ( LIF signaling(JAK1 JAK2 STAT3) ) INOH
SMAD1 pathway0001452 Negative regulation of (nuclear import of R-smad:smad4) in TGF beta super family signaling pathway ( TGF-beta_super_family_signaling_pathway(canonical) ) INOH
SMAD1 pathway0001455 Negative regulation of (transcription by R-smad:smad4) in TGF beta super family signaling pathway ( TGF-beta_super_family_signaling_pathway(canonical) ) INOH
SMAD1 pathway0001517 Notch NetPath
SMAD1 pathway0002009 Signaling by BMP Reactome
SMAD1 pathway0002217 TGF-beta signaling pathway PANTHER
SMAD1 pathway0002218 TGF-beta_super_family_signaling_pathway(canonical) ( TGF-beta_BMP Diagram(MolecularVariation) ) INOH
SMAD1 pathway0002439 Wnt NetPath
SMAD1 pathway0002449 Wnt signaling pathway PANTHER
SMAD1 pathway0002591 TGF-beta signaling pathway KEGG
SMAD1 pathway0002731 Hs_Integrated_Breast_Cancer_Pathway_WP1984_82941 WikiPathways
SMAD1 pathway0002747 Hs_Neural_Crest_Differentiation_WP2064_79263 WikiPathways
SMAD1 pathway0002768 Hs_Heart_Development_WP1591_90186 WikiPathways
SMAD1 pathway0002770 Hs_Bone_Morphogenic_Protein_(BMP)_Signalling_and_Regulation_WP1425_86082 WikiPathways
SMAD1 pathway0002792 Hs_G13_Signaling_Pathway_WP524_72112 WikiPathways
SMAD1 pathway0002826 Hs_Mesodermal_Commitment_Pathway_WP2857_87780 WikiPathways
SOX17 pathway0000549 Deactivation of the beta-catenin transactivating complex Reactome
SOX17 pathway0002587 Wnt signaling pathway KEGG
SOX17 pathway0002740 Hs_Endoderm_Differentiation_WP2853_88152 WikiPathways
SOX3 pathway0000549 Deactivation of the beta-catenin transactivating complex Reactome
SOX5 pathway0002725 Hs_Endochondral_Ossification_WP474_87977 WikiPathways
SOX5 pathway0002747 Hs_Neural_Crest_Differentiation_WP2064_79263 WikiPathways
SOX9 pathway0000549 Deactivation of the beta-catenin transactivating complex Reactome
SOX9 pathway0002222 TGF_beta_Receptor NetPath
SOX9 pathway0002747 Hs_Neural_Crest_Differentiation_WP2064_79263 WikiPathways
SOX9 pathway0002791 Hs_Spinal_Cord_Injury_WP2431_87678 WikiPathways
SRF pathway0000492 Coregulation of Androgen receptor activity PID
SRF pathway0000692 ErbB1 downstream signaling PID
SRF pathway0001191 Interleukin signaling pathway PANTHER
SRF pathway0001572 p38 MAPK pathway PANTHER
SRF pathway0001574 p38 signaling mediated by MAPKAP kinases PID
SRF pathway0001604 PDGF signaling pathway PANTHER
SRF pathway0001605 PDGFR-alpha signaling pathway PID
SRF pathway0001606 PDGFR-beta signaling pathway PID
SRF pathway0001805 Ras Pathway PANTHER
SRF pathway0001894 RHO GTPases Activate Formins Reactome
SRF pathway0001903 RhoA signaling pathway PID
SRF pathway0002034 Signaling events mediated by HDAC Class II PID
SRF pathway0002340 Trk receptor signaling mediated by the MAPK pathway PID
SRF pathway0002562 MAPK signaling pathway KEGG
SRF pathway0002743 Hs_VEGFA-VEGFR2_Signaling_Pathway_WP3888_90000 WikiPathways
SRF pathway0002750 Hs_Serotonin_Receptor_4-6-7_and_NR3C_Signaling_WP734_74438 WikiPathways
SRF pathway0002826 Hs_Mesodermal_Commitment_Pathway_WP2857_87780 WikiPathways
SRF pathway0002834 Hs_Serotonin_Receptor_2_and_ELK-SRF-GATA4_signaling_WP732_80010 WikiPathways
SRY pathway0000176 AndrogenReceptor NetPath
SRY pathway0000549 Deactivation of the beta-catenin transactivating complex Reactome
SRY pathway0001825 Regulation of Androgen receptor activity PID
TBX19 pathway0002699 Hs_Corticotropin-releasing_hormone_signaling_pathway_WP2355_90017 WikiPathways
TCF3 pathway0000393 CDO in myogenesis Reactome
TCF3 pathway0001078 ID NetPath
TCF3 pathway0001516 Notch-mediated HES/HEY network PID
TCF3 pathway0001517 Notch NetPath
TCF3 pathway0001574 p38 signaling mediated by MAPKAP kinases PID
TCF3 pathway0001849 Regulation of nuclear SMAD2/3 signaling PID
TCF3 pathway0002439 Wnt NetPath
TCF3 pathway0002841 Hs_Ectoderm_Differentiation_WP2858_89329 WikiPathways
VDR pathway0000608 Direct p53 effectors PID
VDR pathway0001534 Nuclear Receptor transcription pathway Reactome
VDR pathway0001849 Regulation of nuclear SMAD2/3 signaling PID
VDR pathway0001883 Retinoic acid receptors-mediated signaling PID
VDR pathway0001947 RXR and RAR heterodimerization with other nuclear receptor PID
VDR pathway0002222 TGF_beta_Receptor NetPath
VDR pathway0002393 Validated transcriptional targets of deltaNp63 isoforms PID
VDR pathway0002394 Validated transcriptional targets of TAp63 isoforms PID
VDR pathway0002431 Vitamin D metabolism and pathway PANTHER
VDR pathway0002685 Hs_Drug_Induction_of_Bile_Acid_Pathway_WP2289_88593 WikiPathways