General Details

Sample Id:Sample_02_427
Genome:Homo sapiens-hg19
Series: GSE97527
Biosample Type:Cell line
Tissue Type:Colon
Sample Name:HCT116_shPAF1
PMID: 28860207|
Data Source:NCBI GEO/SRA

Software and Parameters Used

Read Mapping:Bowtie (version 0.12.9)
parameters,-e 70 -k 2 -n 2 -m 2 -S -q.
Peak Calling:MACS (version 1.4.2)
parameters,-p 1e-9 -w -S --keep-dup=auto --wig --single-profile --space=50.
Stitching Distance:12.5 kb
TSS Exclusive Zone:+/- 2 kb

Super-enhancer Table



Using these SE regions to analyze by online tools GREAT
SE ID Chrome Start End TF Identified by ChIP-seq TF Predicted by Motif Master TF Pathway Element Conservation Visualization
SE_02_42700001 chr4 30744128 30882720 41 255 2 2137 5 0.056467
SE_02_42700002 chr10 114204239 114325706 43 254 3 2172 5 0.12267
SE_02_42700003 chr8 94814147 94974018 49 275 3 3054 10 0.0702276
SE_02_42700004 chr9 21519005 21618659 44 201 1 2209 6 0.0701643
SE_02_42700005 chr12 76078180 76193039 36 255 2 2811 8 0.0592329
SE_02_42700006 chr4 169395565 169534575 44 246 3 2422 12 -0.0067089
SE_02_42700007 chr8 128216260 128287487 38 186 2 1832 4 NA
SE_02_42700008 chr3 114315282 114389622 37 137 1 1193 6 0.14007
SE_02_42700009 chr3 111564127 111700159 43 242 2 2274 10 0.0665924
SE_02_42700010 chr4 75533345 75609287 38 137 1 1769 5 0.0128239
SE_02_42700011 chr8 126647926 126716499 45 169 1 1946 4 0.0132863
SE_02_42700012 chr7 130558376 130610699 34 187 3 1662 1 0.0298586
SE_02_42700013 chr1 66718669 66826446 39 181 1 1896 9 0.052195
SE_02_42700014 chr4 102021190 102162042 33 222 2 2085 11 0.0340347
SE_02_42700015 chr5 115165913 115277762 43 209 1 2056 5 0.0680664
SE_02_42700016 chr4 31017326 31111714 36 198 1 2084 2 0.0414647
SE_02_42700017 chr9 21668015 21713540 39 93 0 1192 2 0.0414198
SE_02_42700018 chr12 76011858 76063726 37 151 3 1509 4 0.063162
SE_02_42700019 chr2 226977966 227082546 38 153 1 1685 9 0.0340102
SE_02_42700020 chr12 89310554 89365983 37 145 1 1447 4 0.0574835
SE_02_42700021 chr2 182630301 182686115 41 123 2 1777 3 0.0559377
SE_02_42700022 chr10 114119028 114189735 39 140 2 1935 5 0.0342214
SE_02_42700023 chr1 8064402 8199388 46 237 2 2433 17 0.0181323
SE_02_42700024 chr17 57823628 57872671 37 161 0 1678 5 0.0520199
SE_02_42700025 chr12 46821974 46920110 33 188 3 1707 10 0.0629903
SE_02_42700026 chr3 98671292 98706589 39 116 0 1308 1 0.0703574
SE_02_42700027 chr18 3583093 3629454 43 157 1 1615 3 0.016365
SE_02_42700028 chrX 45556152 45684933 39 236 2 2142 8 0.0570637
SE_02_42700029 chr6 151333465 151410378 39 194 2 2121 6 0.00467355
SE_02_42700030 chr10 32150247 32251116 40 181 3 2062 8 0.0457233
SE_02_42700031 chr17 57902104 57931429 42 83 0 1011 2 0.0657856
SE_02_42700032 chr1 84606139 84645605 34 103 0 1047 2 0.100435
SE_02_42700033 chr4 11488700 11554454 35 164 0 1420 8 -0.0197071
SE_02_42700034 chr4 30896581 30976756 33 181 2 1494 5 0.032522
SE_02_42700035 chr4 75225576 75292752 41 178 2 1670 8 0.00825563
SE_02_42700036 chr4 11599840 11655676 40 137 1 1732 5 -0.0287659
SE_02_42700037 chr11 122042847 122069711 29 88 1 1274 1 0.0915924
SE_02_42700038 chr17 56427862 56506801 45 174 3 1660 4 0.129441
SE_02_42700039 chr6 159107042 159165654 43 147 2 1560 5 -0.0171786
SE_02_42700040 chr1 149800478 149836467 28 101 2 1593 1 0.0512874
SE_02_42700041 chr8 126121702 126207211 38 136 2 1899 7 0.0546388
SE_02_42700042 chr4 187724444 187769135 38 138 2 1413 4 0.00996834
SE_02_42700043 chr1 94692919 94796202 42 192 2 2019 11 0.0701768
SE_02_42700044 chr2 182712185 182795914 40 151 1 1455 8 0.0935831
SE_02_42700045 chr10 95180683 95244073 37 193 3 1758 7 0.023906
SE_02_42700046 chr8 130692924 130739874 41 136 1 1629 5 0.0301277
SE_02_42700047 chr11 65220062 65276627 46 166 2 1933 5 0.0291268
SE_02_42700048 chr8 145006617 145028845 36 125 3 1563 1 0.0284156
SE_02_42700049 chr12 66207538 66297737 42 180 2 1946 9 0.0457444
SE_02_42700050 chr12 66023088 66055318 39 131 3 1661 1 0.0440681
SE_02_42700051 chr14 69243912 69267206 42 126 3 1354 1 0.115542
SE_02_42700052 chr18 68021933 68065967 31 119 1 1302 3 0.018678
SE_02_42700053 chr4 168991283 169076531 34 178 1 1283 6 -0.00999107
SE_02_42700054 chr4 114353197 114400748 35 133 1 1570 5 0.0648517
SE_02_42700055 chr11 122005991 122042691 30 115 1 1483 1 0.111194
SE_02_42700056 chr10 101519152 101546636 32 73 1 984 2 0.0483537
SE_02_42700057 chr1 33883534 33939104 43 148 4 1895 7 0.0852379
SE_02_42700058 chr15 60641436 60701844 41 148 2 1630 6 0.0277629
SE_02_42700059 chr10 28361071 28437265 28 150 1 1599 8 0.0373969
SE_02_42700060 chr9 109969193 110012610 38 113 2 1561 3 0.0670778
SE_02_42700061 chr12 46940291 46957759 25 61 1 674 2 0.0891588
SE_02_42700062 chr19 13946353 13968034 39 143 3 1819 1 0.0401853
SE_02_42700063 chr10 101721038 101770858 42 119 2 1503 4 0.0302758
SE_02_42700064 chr2 227502559 227549000 40 128 2 1471 6 0.0340309
SE_02_42700065 chr12 125388865 125426362 46 121 1 1787 4 -0.00158023
SE_02_42700066 chr3 98593899 98644656 42 132 1 1298 6 0.0686246
SE_02_42700067 chr8 126270375 126324453 36 145 2 1531 5 0.0554501
SE_02_42700068 chr5 76062246 76136710 42 141 1 1487 12 0.0156838
SE_02_42700069 chr20 30248967 30329396 40 186 3 2196 8 0.0806443
SE_02_42700070 chr7 13052522 13117913 40 160 2 1617 8 0.0314067
SE_02_42700071 chr6 30707378 30755043 44 151 3 2138 6 0.0433529
SE_02_42700072 chr4 187597036 187659433 44 155 2 1844 10 -9.27E-05
SE_02_42700073 chr3 98269679 98287155 32 59 0 924 1 0.0657064
SE_02_42700074 chr10 3780475 3832423 41 121 2 1793 4 -0.0595559
SE_02_42700075 chr11 118776880 118810645 40 146 3 1547 3 0.139965
SE_02_42700076 chr12 76325655 76393166 34 151 2 1724 8 0.0520858
SE_02_42700077 chr12 122221376 122245018 36 131 3 1382 1 0.0654601
SE_02_42700078 chr2 224383795 224442947 37 133 4 1523 4 0.0339436
SE_02_42700079 chr8 6402452 6466990 34 153 2 1846 7 -0.0141506
SE_02_42700080 chr12 13021623 13063669 39 137 2 1586 5 0.00688684
SE_02_42700081 chr20 61362567 61377578 33 95 1 1335 2 -0.0685585
SE_02_42700082 chr5 141695255 141747977 40 134 3 1651 6 0.0572111
SE_02_42700083 chr12 116929167 116973290 43 146 2 1696 4 0.031747
SE_02_42700084 chr17 62618105 62710604 44 170 2 1582 11 0.033861
SE_02_42700085 chr8 103799685 103824363 38 118 1 1557 3 0.0414311
SE_02_42700086 chr12 65880940 65934015 35 104 2 1036 7 0.0371914
SE_02_42700087 chr17 39102629 39120862 38 91 1 1403 2 0.0817517
SE_02_42700088 chr8 126223570 126253323 37 96 1 1367 3 0.0503927
SE_02_42700089 chr2 220548360 220598453 39 127 1 1526 3 0.0715626
SE_02_42700090 chr14 68986071 69067685 35 169 2 1805 9 0.0735673
SE_02_42700091 chr6 56572546 56623623 35 95 0 1073 3 0.0559577
SE_02_42700092 chr16 69417829 69461672 43 123 1 1509 5 0.0467764
SE_02_42700093 chr7 120917420 120986091 37 164 1 1747 6 0.0929363
SE_02_42700094 chr19 39125178 39186719 37 168 2 2089 5 0.0505674
SE_02_42700095 chr6 145215311 145254375 33 119 1 1492 4 0.0417122
SE_02_42700096 chr3 30637233 30674837 40 122 0 1456 2 0.0550224
SE_02_42700097 chr7 116310112 116358079 41 128 2 1375 5 0.127043
SE_02_42700098 chr12 52536295 52559208 42 98 3 1262 3 0.010038
SE_02_42700099 chr12 104648555 104706240 34 116 0 1140 9 0.0535178
SE_02_42700100 chr10 54067331 54096931 37 82 2 1125 4 0.0579678
SE_02_42700101 chr8 126437205 126494071 44 115 1 1412 4 0.0533985
SE_02_42700102 chr9 21770324 21816116 38 96 3 1099 7 0.0520923
SE_02_42700103 chr19 13250332 13285166 45 171 3 1873 5 0.0152091
SE_02_42700104 chr10 102104987 102136752 44 112 2 1389 5 0.0760389
SE_02_42700105 chr17 79475403 79488259 40 87 3 1310 1 -0.0204375
SE_02_42700106 chr3 45132783 45188916 42 146 0 1755 6 0.04684
SE_02_42700107 chr6 129809208 129825081 33 98 0 1230 2 0.0931709
SE_02_42700108 chr2 87751579 87770158 25 54 0 856 3 0.0437732
SE_02_42700109 chr3 110283397 110306975 32 59 0 734 2 0.0311423
SE_02_42700110 chr2 85131442 85201803 44 136 3 1584 8 0.0312237
SE_02_42700111 chr2 112236941 112255987 24 57 0 957 3 0.038308
SE_02_42700112 chr18 67945703 68005682 32 159 2 1692 8 0.0514128
SE_02_42700113 chr3 114212637 114230042 27 67 1 899 1 0.177411
SE_02_42700114 chr22 46461029 46483663 35 150 3 1495 1 0.0759636
SE_02_42700115 chr11 65183346 65201465 43 128 2 1536 2 0.0286038
SE_02_42700116 chr14 68591523 68679150 31 137 1 1717 12 0.107182
SE_02_42700117 chr1 151942564 151969241 41 94 0 1328 4 0.0795089
SE_02_42700118 chr18 57615805 57630092 29 58 1 954 1 0.0160041
SE_02_42700119 chr10 105868245 105884517 39 61 1 1133 2 0.0789068
SE_02_42700120 chr9 75723763 75773589 28 97 1 1107 7 0.0365286
SE_02_42700121 chr2 226893307 226945712 38 101 3 1300 4 0.0235938
SE_02_42700122 chr2 110856343 110875104 40 101 0 1472 2 0.0109242
SE_02_42700123 chr11 69048058 69072324 33 76 1 1016 2 -0.0105491
SE_02_42700124 chr6 34190589 34217705 39 146 3 1757 2 0.0965077
SE_02_42700125 chr1 68840543 68865583 32 82 0 967 5 0.0360305
SE_02_42700126 chr7 130516514 130541440 35 83 1 1271 2 0.00377691
SE_02_42700127 chr2 169044944 169078468 36 131 1 1273 1 0.058141
SE_02_42700128 chr4 79454356 79492275 37 101 1 1454 3 0.032797
SE_02_42700129 chr12 49875292 49913854 31 102 0 1670 3 0.0779881
SE_02_42700130 chr11 62305424 62342775 40 126 1 1560 5 0.0657786
SE_02_42700131 chr15 67315992 67421278 40 201 3 2392 12 0.0447377
SE_02_42700132 chr8 62660477 62681769 30 79 0 994 2 0.0123682
SE_02_42700133 chr7 116137826 116170016 35 106 3 1083 3 0.0823632
SE_02_42700134 chr14 31491718 31541484 38 135 2 1689 6 0.0402567
SE_02_42700135 chr8 128744449 128757411 43 79 2 1116 1 0.117232
SE_02_42700136 chr16 69049955 69113822 31 114 0 1226 9 0.036432
SE_02_42700137 chr10 65454745 65480232 36 104 2 1403 2 0.0847095
SE_02_42700138 chr20 52737114 52767074 32 78 0 1372 3 0.00592921
SE_02_42700139 chr12 46756336 46782007 40 99 1 1213 2 0.111013
SE_02_42700140 chr8 132851857 132873579 34 72 1 1267 3 0.0356864
SE_02_42700141 chr1 156065975 156101939 45 150 3 1993 4 0.0864867
SE_02_42700142 chr13 109894120 109928392 32 142 2 1504 6 0.0176929
SE_02_42700143 chr6 145117008 145142856 31 71 1 850 3 0.0628806
SE_02_42700144 chr1 16465150 16516665 43 169 3 2357 10 0.0487643
SE_02_42700145 chr6 20997022 21026546 33 62 2 929 2 0.0590153
SE_02_42700146 chr2 182810022 182825267 29 58 2 1069 1 0.0511105
SE_02_42700147 chr12 65818687 65851079 28 57 1 895 3 0.0576475
SE_02_42700148 chr17 39056967 39079689 33 86 2 986 4 0.0173144
SE_02_42700149 chr10 23103361 23116209 32 53 0 788 1 0.0290048
SE_02_42700150 chr1 172837994 172904808 35 142 1 1505 7 0.0409907
SE_02_42700151 chr8 17692831 17716113 29 75 1 908 2 0.0167991
SE_02_42700152 chr5 145304115 145328371 33 73 1 1346 2 0.0590768
SE_02_42700153 chr2 188403275 188419932 27 58 0 697 2 0.0326874
SE_02_42700154 chr3 185490905 185545092 37 133 1 1567 7 0.0890235
SE_02_42700155 chr7 5456776 5470396 36 99 3 1440 1 0.115015
SE_02_42700156 chr6 32934125 32942800 37 84 2 1135 1 0.104954
SE_02_42700157 chr20 49340084 49381496 40 106 2 1484 2 0.0634254
SE_02_42700158 chr10 105647091 105679294 40 106 1 1359 4 0.0579774
SE_02_42700159 chr7 23502823 23515872 34 76 0 750 1 0.152872
SE_02_42700160 chr8 29511924 29535110 35 66 0 1150 4 0.0299149
SE_02_42700161 chr6 74224185 74235646 42 52 1 991 1 0.0518222
SE_02_42700162 chr17 73670577 73720834 40 137 2 1696 4 0.0239635
SE_02_42700163 chr10 28488774 28544559 34 89 0 981 6 0.0510484
SE_02_42700164 chr19 11195334 11214496 39 98 2 1331 3 -0.0308154
SE_02_42700165 chr9 132238393 132270322 34 143 2 1526 5 0.0151283
SE_02_42700166 chr6 64199939 64256394 35 139 3 1541 6 0.0248891
SE_02_42700167 chr17 11923649 11953229 36 92 1 1688 2 0.0757184
SE_02_42700168 chr6 159268933 159293145 42 81 3 1103 2 0.0257521
SE_02_42700169 chr6 129498440 129514286 22 53 1 779 1 0.0658352
SE_02_42700170 chr12 109215231 109252231 39 115 2 1483 4 0.0155745
SE_02_42700171 chr3 111435567 111489672 33 128 0 1473 9 0.0725131
SE_02_42700172 chr7 116064971 116119128 33 107 1 899 10 0.0436824
SE_02_42700173 chr8 101948943 101967426 39 78 1 973 2 0.0612999
SE_02_42700174 chr15 93441153 93453154 33 75 1 1248 1 0.12607
SE_02_42700175 chr12 76409364 76431940 38 89 0 1369 2 0.0853542
SE_02_42700176 chr13 97904258 97933265 32 109 1 863 3 NA
SE_02_42700177 chrX 46174779 46194222 28 79 1 1142 2 0.0843
SE_02_42700178 chr19 44243252 44290122 38 115 2 1581 4 0.0511268
SE_02_42700179 chr12 76243141 76308082 29 108 1 1275 9 0.0569716
SE_02_42700180 chr11 10667860 10692706 35 103 1 1249 3 0.0864879
SE_02_42700181 chr1 164701124 164757347 31 131 1 1580 7 0.101332
SE_02_42700182 chr20 33890137 33916387 35 76 0 1592 3 0.104806
SE_02_42700183 chr2 157187870 157202155 41 86 1 1136 1 0.211701
SE_02_42700184 chr7 23372085 23421915 32 101 1 1290 6 0.0372051
SE_02_42700185 chr4 99543031 99585692 37 78 1 1284 3 0.0913436
SE_02_42700186 chr11 69450082 69460662 31 102 1 1160 1 0.113174
SE_02_42700187 chr18 18879249 18914621 26 68 1 795 5 0.0928057
SE_02_42700188 chr6 26019653 26036243 41 72 0 1133 1 -0.0438346
SE_02_42700189 chr10 43888969 43918204 38 116 1 1423 3 0.00202908
SE_02_42700190 chr1 8214241 8273431 37 140 2 1492 7 -0.037364
SE_02_42700191 chr18 3245658 3265939 40 85 2 1363 2 0.0728736
SE_02_42700192 chr3 65922508 65958833 33 139 1 1280 4 0.0351833
SE_02_42700193 chr1 43388027 43434900 42 188 3 2166 4 0.0840267
SE_02_42700194 chr5 82247008 82282329 31 89 0 1113 4 0.0352894
SE_02_42700195 chr1 43809983 43841798 39 106 1 1367 6 0.113507
SE_02_42700196 chr10 3845015 3872176 32 89 2 1503 3 -0.0789246
SE_02_42700197 chr7 79900750 79919245 30 58 0 1285 3 0.040437
SE_02_42700198 chr6 142327099 142337036 30 22 0 809 1 0.0091518
SE_02_42700199 chr17 80162939 80206345 41 142 3 1524 6 -0.0418748
SE_02_42700200 chr12 120662212 120703924 34 121 2 1490 6 0.065126
SE_02_42700201 chr4 26566773 26593279 42 79 0 1569 3 0.0633154
SE_02_42700202 chrX 77358378 77362155 35 31 0 825 1 0.00938396
SE_02_42700203 chr8 126555241 126576687 34 54 0 972 4 0.0592748
SE_02_42700204 chr2 224556265 224567908 29 37 0 779 2 0.018543
SE_02_42700205 chr4 187840891 187859077 31 64 2 1164 2 0.00349603
SE_02_42700206 chr1 32386281 32422636 39 107 2 1344 4 0.090985
SE_02_42700207 chr10 92064146 92087578 30 66 0 835 3 0.0344604
SE_02_42700208 chr9 37462697 37488238 37 114 1 1409 2 0.0519035
SE_02_42700209 chr6 49499324 49534633 33 85 1 1094 4 0.0223767
SE_02_42700210 chr18 3445671 3460568 38 77 2 1141 1 0.142155
SE_02_42700211 chr12 53746398 53776563 38 99 2 1357 4 0.0288513
SE_02_42700212 chr19 1743852 1756847 35 89 3 1338 2 -0.00761232
SE_02_42700213 chr11 67118486 67148849 36 118 2 1360 2 0.0953794
SE_02_42700214 chr8 8859712 8874580 35 46 0 698 1 0.0429225
SE_02_42700215 chr19 1243469 1256345 31 111 2 1015 1 0.0417572
SE_02_42700216 chr16 89554219 89576675 40 60 1 1004 3 -0.0314458
SE_02_42700217 chr18 3647784 3668179 38 94 1 1159 3 0.0483998
SE_02_42700218 chr17 39675800 39707046 40 97 2 1307 3 0.0298783
SE_02_42700219 chr5 81642732 81665176 35 88 1 1202 1 NA
SE_02_42700220 chr10 22714688 22729423 39 75 1 1105 2 0.0661695
SE_02_42700221 chr19 15934670 15950727 40 74 1 1093 1 0.0125873
SE_02_42700222 chr15 72514146 72531773 39 85 1 1151 4 0.0511056
SE_02_42700223 chr4 75308183 75324678 37 75 2 1070 1 0.0457214
SE_02_42700224 chr7 27199997 27214571 37 89 3 1007 1 0.215445
SE_02_42700225 chr4 41124172 41165670 32 101 0 1277 4 0.0323367
SE_02_42700226 chr12 98790042 98798902 29 61 1 732 1 0.0423435
SE_02_42700227 chr4 75477951 75493449 4 61 2 705 1 0.0456949
SE_02_42700228 chr2 62795213 62808338 35 59 1 820 1 0.0928651
SE_02_42700229 chr11 101978832 101993612 40 83 0 1014 2 0.0768239
SE_02_42700230 chr15 96793968 96829643 31 100 2 1126 3 0.0766287
SE_02_42700231 chr11 108739743 108778880 29 92 0 1048 4 0.0553977
SE_02_42700232 chr3 139016578 139038715 36 77 1 1385 3 0.0753175
SE_02_42700233 chr11 65676291 65688675 36 91 2 1424 1 0.100658
SE_02_42700234 chr7 130690884 130702078 30 64 1 793 1 0.0442247
SE_02_42700235 chr1 28825776 28855467 42 79 1 1146 5 0.0119639
SE_02_42700236 chr18 9867444 9934533 40 121 2 1212 8 0.0327823
SE_02_42700237 chr3 7913387 7921765 32 36 0 725 1 0.00898093
SE_02_42700238 chr13 101033818 101050125 29 53 0 783 2 0.0676349
SE_02_42700239 chr2 70307905 70317317 31 69 1 900 1 0.110767
SE_02_42700240 chr10 114708650 114724465 36 83 2 925 2 0.220847
SE_02_42700241 chr6 86158189 86180472 39 77 2 1288 2 0.0220584
SE_02_42700242 chr5 56659025 56681560 33 49 1 929 2 0.0353449
SE_02_42700243 chr8 16667628 16697150 35 89 0 1230 5 0.0126309
SE_02_42700244 chr11 102462848 102484501 32 79 1 1058 3 0.023038
SE_02_42700245 chr4 101929036 101964917 33 93 0 1354 4 0.0731974
SE_02_42700246 chr1 223886906 223916018 36 77 2 1273 5 0.0169497
SE_02_42700247 chr17 48124263 48145479 38 110 2 1433 2 0.0774967
SE_02_42700248 chr12 31883380 31917427 32 91 1 1121 5 0.0239294
SE_02_42700249 chr1 156713515 156723111 32 69 2 850 1 0.154207
SE_02_42700250 chr12 6470044 6487647 33 107 2 1282 2 0.0347239
SE_02_42700251 chr2 227617379 227638489 31 51 1 926 3 0.0959027
SE_02_42700252 chr15 93342790 93376429 38 125 1 1383 3 0.0159792
SE_02_42700253 chr6 159180905 159241708 39 169 4 2003 10 0.0103204
SE_02_42700254 chr3 156844516 156894816 43 68 1 1012 4 0.0894714
SE_02_42700255 chr12 96586882 96595953 31 70 2 1182 1 0.0894744
SE_02_42700256 chr10 21813838 21829580 36 89 2 1171 2 0.102581
SE_02_42700257 chr20 45943079 45964535 32 58 2 839 2 0.0203447
SE_02_42700258 chr2 173291519 173315634 35 107 2 1339 3 0.0772045
SE_02_42700259 chr17 65403587 65438498 36 67 1 986 4 0.0201876
SE_02_42700260 chr14 54714938 54727970 35 50 1 876 1 0.0801331
SE_02_42700261 chr22 37699955 37733992 44 116 2 1457 3 0.00318391
SE_02_42700262 chr17 811477 843009 31 66 1 1115 4 -0.0439345
SE_02_42700263 chr7 44644938 44694946 39 101 1 1187 4 0.0409647
SE_02_42700264 chr16 2722115 2736832 40 111 1 1161 1 -0.0159023
SE_02_42700265 chr4 11697456 11722575 31 32 2 637 3 NA
SE_02_42700266 chr3 177062111 177079537 36 90 2 1125 2 0.0640786
SE_02_42700267 chr19 2149417 2175818 37 115 2 1173 4 -0.0319523
SE_02_42700268 chr19 39887685 39904017 41 129 3 1593 1 0.077996
SE_02_42700269 chr21 16422224 16439858 19 80 3 635 1 0.12747
SE_02_42700270 chr13 44874218 44889908 32 60 1 765 2 0.0529886
SE_02_42700271 chr2 112061956 112080249 18 54 2 826 2 0.00468972
SE_02_42700272 chr22 38137035 38159646 38 109 1 1307 2 0.0567189
SE_02_42700273 chr10 91980424 91990734 31 31 0 739 1 0.0374109
SE_02_42700274 chr10 17683941 17718048 30 74 1 814 4 0.0605729
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SE_02_42700553 chr12 112532563 112556040 34 86 1 1031 3 0.0277369
SE_02_42700554 chr12 66328088 66356035 31 80 0 1295 2 0.0542509
SE_02_42700555 chr2 64869341 64883181 33 80 3 1014 1 0.143723
SE_02_42700556 chr20 52782130 52795531 33 79 2 1292 1 0.0227725
SE_02_42700557 chr19 41724123 41736765 35 82 2 1279 1 0.0309153
SE_02_42700558 chr20 47891544 47899832 38 67 2 1062 1 0.0225058
SE_02_42700559 chr10 88725269 88733401 36 78 2 1137 1 -0.024485

Master TFs Network

CRC model in Sample_02_427