About Enhancer
| Enhancer ID: | E_01_222 | |
| Enhancer symbol: | -- | |
| Species: | Human | |
| Position : | chr4:56895793-56962351   |
|
| Biosample name: | Human Embryonic Kidney Cell | |
| Experiment class : | Low+High throughput |
| Enhancer type: | Enhancer | |
| Disease: | -- | |
| DO: | -- | |
| Mesh: | -- | |
| Distance from TSS: | >2KB | |
| Pubmed ID: | 26257179 |
| Enhancer experiment: | ChIP-seq,5' RACE | |
| Enhancer experiment description: | As a representative example, we highlight cheRNA1345, which is produced from a locus ~15 kb downstream of Cep135 and overlaps with an experimentally validated tissue-specific Enhancer element (Figure 4E) (Visel et al., 2007). Peaks of H3K4me3, H3K27ac, and RNAPII decorate the TSS, which we validated by 5' RACE, and also bears a number of validated transcription factor binding sites (Gerstein et al., 2012). Similar patterns are observed with other cheRNA loci (Figure S3A–C). |
About Target gene
| Target gene : | CEP135(CEP4,KIAA0635,MCPH8) | |
| Strong evidence: | -- | |
| Less strong evidence: | ChIP-seq,5' RACE | |
| Target gene experiment description: | As a representative example, we highlight cheRNA1345, which is produced from a locus ~15 kb downstream of Cep135 and overlaps with an experimentally validated tissue-specific Enhancer element (Figure 4E) (Visel et al., 2007). Peaks of H3K4me3, H3K27ac, and RNAPII decorate the TSS, which we validated by 5' RACE, and also bears a number of validated transcription factor binding sites (Gerstein et al., 2012). Similar patterns are observed with other cheRNA loci (Figure S3A–C). |
About TF
| TF name : | -- | |
| TF experiment: | -- | |
| TF experiment description: | -- |
About Function
| Enhancer function : | -- |
| Enhancer function experiment: | -- |
| Enhancer function experiment description: |
-- |
About SNP
| SNP ID: | -- | |
| SNP position: | -- |
| SNP experiment: | -- |
Enhancer associated network
The number on yellow line represents the distance between enhancer and target gene
