Gene name	Rsid	Chr	Position	P value	Cancer	Beta	T stat
NEAT1	rs10896002	chr11	65218064	0.0000997	BLCA_tumor	0.27	3.93
NEAT1	rs113708711	chr11	65219128	0.0000993	BLCA_tumor	0.27	3.93
NEAT1	rs113869125	chr11	65231124	0.0000608	BLCA_tumor	0.27	4.05
NEAT1	rs1194758	chr11	65238085	0.00000393	BLCA_tumor	-0.3	-4.68
NEAT1	rs12800581	chr11	65248750	0.00000283	BLCA_tumor	0.3	4.75
NEAT1	rs12807143	chr11	65249731	0.00000236	BLCA_tumor	0.3	4.79
NEAT1	rs1784099	chr11	65227515	0.0000973	BLCA_tumor	0.26	3.94
NEAT1	rs1787666	chr11	65249089	0.00000166	BLCA_tumor	0.31	4.87
NEAT1	rs2957267	chr11	65235792	0.0000308	BLCA_tumor	0.27	4.22
NEAT1	rs2957270	chr11	65218102	0.0000997	BLCA_tumor	0.27	3.93
NEAT1	rs3016342	chr11	65243088	0.00000199	BLCA_tumor	0.31	4.83
NEAT1	rs3132770	chr11	65251317	0.00000309	BLCA_tumor	0.3	4.74
NEAT1	rs34602315	chr11	65248881	0.00000162	BLCA_tumor	0.31	4.87
NEAT1	rs35940245	chr11	65232673	0.0000432	BLCA_tumor	0.27	4.14
NEAT1	rs475967	chr11	65206917	0.0000599	BLCA_tumor	0.3	4.06
NEAT1	rs512715	chr11	65191208	0.0000126	BLCA_tumor	-0.23	-4.42
NEAT1	rs550894	chr11	65211940	0.0000225	BLCA_tumor	0.32	4.29
NEAT1	rs5792356	chr11	65250325	0.00000375	BLCA_tumor	0.3	4.69
NEAT1	rs616599	chr11	65254025	0.0000366	BLCA_tumor	0.28	4.18
NEAT1	rs667196	chr11	65247092	0.0000271	BLCA_tumor	0.27	4.25
NEAT1	rs679643	chr11	65250590	0.00000375	BLCA_tumor	0.3	4.69
NEAT1	rs686320	chr11	65244538	0.0000271	BLCA_tumor	0.27	4.25
NEAT1	rs71064897	chr11	65249467	0.0000138	BLCA_tumor	0.29	4.4
NEAT1	rs71471974	chr11	65238872	0.00000585	BLCA_tumor	0.3	4.6
NEAT1	rs72643572	chr11	65250967	0.0000181	BLCA_tumor	0.29	4.34
NEAT1	rs10715181	chr11	65253190	0.000000000063	BRCA_tumor	0.19	6.6
NEAT1	rs10896006	chr11	65240213	0.000367	BRCA_tumor	0.13	3.57
NEAT1	rs10896009	chr11	65246054	0.000675	BRCA_tumor	-0.11	-3.41
NEAT1	rs10896010	chr11	65246220	0.000669	BRCA_tumor	0.12	3.41
NEAT1	rs10896016	chr11	65335705	0.00000000793	BRCA_tumor	-0.17	-5.82
NEAT1	rs1111934	chr11	65329392	0.0000000423	BRCA_tumor	0.17	5.52
NEAT1	rs111308917	chr11	65248077	0.000623	BRCA_tumor	0.12	3.43
NEAT1	rs112253806	chr11	65248074	0.000623	BRCA_tumor	0.12	3.43
NEAT1	rs11227196	chr11	65234922	0.000471	BRCA_tumor	0.12	3.51
NEAT1	rs11227197	chr11	65237130	0.000531	BRCA_tumor	0.12	3.48
NEAT1	rs11227198	chr11	65237974	0.000587	BRCA_tumor	0.12	3.45
NEAT1	rs11227199	chr11	65238121	0.000587	BRCA_tumor	0.12	3.45
NEAT1	rs11227200	chr11	65242315	0.0000119	BRCA_tumor	0.17	4.4
NEAT1	rs11227201	chr11	65242548	0.000447	BRCA_tumor	0.12	3.52
NEAT1	rs11227202	chr11	65242717	0.000458	BRCA_tumor	0.12	3.52
NEAT1	rs11227204	chr11	65248444	0.00000000112	BRCA_tumor	0.18	6.15
NEAT1	rs11605125	chr11	65211019	0.000124	BRCA_tumor	0.15	3.85
NEAT1	rs1194758	chr11	65238085	0.00018	BRCA_tumor	-0.14	-3.76
NEAT1	rs12269965	chr11	65232087	0.000292	BRCA_tumor	0.13	3.63
NEAT1	rs12294910	chr11	65231681	0.000188	BRCA_tumor	0.13	3.75
NEAT1	rs12360896	chr11	65238306	0.000601	BRCA_tumor	0.12	3.44
NEAT1	rs12364730	chr11	65228278	0.0000813	BRCA_tumor	0.14	3.96
NEAT1	rs12808303	chr11	65225319	0.0000633	BRCA_tumor	0.14	4.02
NEAT1	rs140456847	chr11	65223539	0.00000000175	BRCA_tumor	0.18	6.07
NEAT1	rs150982812	chr11	65335268	0.000000138	BRCA_tumor	-0.16	-5.3
NEAT1	rs1621277	chr11	65221954	0.00000000993	BRCA_tumor	-0.16	-5.78
NEAT1	rs1626021	chr11	65226187	0.000000000157	BRCA_tumor	0.19	6.46
NEAT1	rs17146964	chr11	65249145	0.000484	BRCA_tumor	-0.12	-3.5
NEAT1	rs1784100	chr11	65249227	0.00000000043	BRCA_tumor	0.18	6.3
NEAT1	rs1784101	chr11	65241282	0.0000000000316	BRCA_tumor	0.2	6.71
NEAT1	rs1784858	chr11	65222952	0.000000000294	BRCA_tumor	0.18	6.36
NEAT1	rs1784859	chr11	65220749	0.0000000000176	BRCA_tumor	-0.19	-6.8
NEAT1	rs1784860	chr11	65240712	0.000000000293	BRCA_tumor	0.18	6.36
NEAT1	rs2105608	chr11	65228618	0.0000000000534	BRCA_tumor	0.19	6.63
NEAT1	rs2508710	chr11	65229828	0.0000342	BRCA_tumor	0.15	4.16
NEAT1	rs2508711	chr11	65243684	0.000000000371	BRCA_tumor	0.18	6.33
NEAT1	rs2508712	chr11	65232261	0.00000000108	BRCA_tumor	0.18	6.15
NEAT1	rs2846861	chr11	65222305	0.000000000301	BRCA_tumor	0.18	6.36
NEAT1	rs2846862	chr11	65219790	0.0000000000938	BRCA_tumor	0.19	6.54
NEAT1	rs2957268	chr11	65245816	0.000000000338	BRCA_tumor	0.18	6.34
NEAT1	rs2957269	chr11	65243007	0.000000000417	BRCA_tumor	0.18	6.31
NEAT1	rs3016343	chr11	65243096	0.000000000779	BRCA_tumor	0.18	6.21
NEAT1	rs3132743	chr11	65251185	0.0000000000737	BRCA_tumor	0.19	6.58
NEAT1	rs3132767	chr11	65234860	0.000000000775	BRCA_tumor	0.18	6.21
NEAT1	rs34005425	chr11	65224568	0.0000000000969	BRCA_tumor	0.19	6.54
NEAT1	rs34512931	chr11	65224560	0.000168	BRCA_tumor	0.13	3.78
NEAT1	rs34527830	chr11	65240863	0.000436	BRCA_tumor	0.12	3.53
NEAT1	rs34877911	chr11	65237224	0.000531	BRCA_tumor	0.12	3.48
NEAT1	rs35292734	chr11	65227700	0.0000501	BRCA_tumor	0.15	4.07
NEAT1	rs35469818	chr11	65232166	0.000292	BRCA_tumor	0.13	3.63
NEAT1	rs35826299	chr11	65240964	0.000436	BRCA_tumor	0.12	3.53
NEAT1	rs35850004	chr11	65250603	0.00041	BRCA_tumor	0.12	3.54
NEAT1	rs35906628	chr11	65251967	0.000441	BRCA_tumor	0.13	3.53
NEAT1	rs3782091	chr11	65336483	0.0000000572	BRCA_tumor	-0.16	-5.47
NEAT1	rs4244811	chr11	65320780	0.0000000224	BRCA_tumor	-0.17	-5.63
NEAT1	rs4930305	chr11	65464000	0.000252	BRCA_tumor	0.1	3.67
NEAT1	rs587080	chr11	65253800	0.000000000149	BRCA_tumor	0.19	6.47
NEAT1	rs587390	chr11	65253789	0.000000000121	BRCA_tumor	0.19	6.5
NEAT1	rs588298	chr11	65253574	0.0000000000106	BRCA_tumor	0.2	6.87
NEAT1	rs602838	chr11	65253247	0.000000000124	BRCA_tumor	0.19	6.5
NEAT1	rs604676	chr11	65253689	0.000000000103	BRCA_tumor	0.19	6.53
NEAT1	rs605035	chr11	65252159	0.00000000011	BRCA_tumor	0.19	6.52
NEAT1	rs660588	chr11	65242340	0.000000000673	BRCA_tumor	0.18	6.23
NEAT1	rs661403	chr11	65242478	0.0000000000392	BRCA_tumor	0.19	6.68
NEAT1	rs673753	chr11	65206017	0.000347	BRCA_tumor	-0.15	-3.59
NEAT1	rs682845	chr11	65254201	0.000000000527	BRCA_tumor	0.18	6.27
NEAT1	rs71064893	chr11	65231865	0.0000000054	BRCA_tumor	0.17	5.88
NEAT1	rs7114809	chr11	65251444	0.0000000000388	BRCA_tumor	0.19	6.68
NEAT1	rs7128776	chr11	65242037	0.000254	BRCA_tumor	0.13	3.67
NEAT1	rs72256166	chr11	65225475	0.000166	BRCA_tumor	0.13	3.78
NEAT1	rs7926512	chr11	65464487	0.000713	BRCA_tumor	-0.09	-3.39
NEAT1	rs7931615	chr11	65232306	0.000266	BRCA_tumor	0.13	3.66
NEAT1	rs7934628	chr11	65232739	0.000000000939	BRCA_tumor	0.18	6.17
NEAT1	rs7935551	chr11	65227632	0.000072	BRCA_tumor	0.14	3.99
NEAT1	rs1206019	chr11	65030804	0.000025	COAD_tumor	-0.25	-4.29
NEAT1	rs12279142	chr11	64962936	0.0000709	COAD_tumor	-0.25	-4.04
NEAT1	rs12418567	chr11	65477963	0.000131	COAD_tumor	-0.31	-3.88
NEAT1	rs1616810	chr11	65220105	0.000115	COAD_tumor	0.2	3.92
NEAT1	rs1784101	chr11	65241282	0.0000528	COAD_tumor	0.21	4.11
NEAT1	rs17884154	chr11	64963175	0.0000445	COAD_tumor	-0.26	-4.15
NEAT1	rs184734	chr11	64982203	0.00003	COAD_tumor	-0.24	-4.25
NEAT1	rs1963977	chr11	65471742	0.000113	COAD_tumor	-0.31	-3.92
NEAT1	rs2127510	chr11	65472727	0.00015	COAD_tumor	-0.31	-3.85
NEAT1	rs239253	chr11	64984743	0.0000279	COAD_tumor	-0.24	-4.27
NEAT1	rs239254	chr11	64986649	0.0000301	COAD_tumor	-0.24	-4.25
NEAT1	rs239255	chr11	64987128	0.0000301	COAD_tumor	-0.24	-4.25
NEAT1	rs239256	chr11	64987391	0.0000301	COAD_tumor	-0.24	-4.25
NEAT1	rs239260	chr11	64983703	0.0000792	COAD_tumor	-0.24	-4.01
NEAT1	rs2513087	chr11	64992238	0.00004	COAD_tumor	-0.24	-4.18
NEAT1	rs2904978	chr11	65000478	0.0000335	COAD_tumor	0.24	4.22
NEAT1	rs36001044	chr11	64964692	0.0000709	COAD_tumor	-0.25	-4.04
NEAT1	rs3862385	chr11	65440432	0.000142	COAD_tumor	-0.33	-3.86
NEAT1	rs4578394	chr11	65453678	0.0000745	COAD_tumor	-0.34	-4.03
NEAT1	rs4645916	chr11	65481529	0.000132	COAD_tumor	-0.31	-3.88
NEAT1	rs512715	chr11	65191208	0.0000181	COAD_tumor	-0.23	-4.37
NEAT1	rs514076	chr11	64990041	0.0000141	COAD_tumor	-0.25	-4.43
NEAT1	rs600135	chr11	64969659	0.0000665	COAD_tumor	-0.26	-4.05
NEAT1	rs601310	chr11	65040436	0.0000782	COAD_tumor	-0.24	-4.01
NEAT1	rs674485	chr11	65197393	0.0000502	COAD_tumor	-0.22	-4.12
NEAT1	rs7102307	chr11	64962879	0.0000709	COAD_tumor	-0.25	-4.04
NEAT1	rs7107503	chr11	65471258	0.000147	COAD_tumor	-0.31	-3.85
NEAT1	rs7116556	chr11	64962866	0.0000709	COAD_tumor	-0.25	-4.04
NEAT1	rs7122081	chr11	65471391	0.000147	COAD_tumor	-0.31	-3.85
NEAT1	rs7122098	chr11	65471422	0.000147	COAD_tumor	-0.31	-3.85
NEAT1	rs34743766	chr11	65207931	0.00000769	GBM_tumor	0.41	4.67
NEAT1	rs512715	chr11	65191208	0.0000255	GBM_tumor	-0.33	-4.37
NEAT1	rs10715181	chr11	65253190	0.00000366	HNSC_tumor	0.18	4.68
NEAT1	rs10896000	chr11	65218018	0.0000431	HNSC_tumor	0.16	4.13
NEAT1	rs10896001	chr11	65218038	0.0000438	HNSC_tumor	0.16	4.12
NEAT1	rs11227204	chr11	65248444	0.00000915	HNSC_tumor	0.17	4.48
NEAT1	rs112540389	chr11	65219482	0.000000668	HNSC_tumor	0.19	5.04
NEAT1	rs140456847	chr11	65223539	0.0000127	HNSC_tumor	0.17	4.41
NEAT1	rs1616810	chr11	65220105	0.0000553	HNSC_tumor	0.15	4.07
NEAT1	rs1626021	chr11	65226187	0.0000208	HNSC_tumor	0.16	4.3
NEAT1	rs1784100	chr11	65249227	0.000017	HNSC_tumor	0.17	4.34
NEAT1	rs1784101	chr11	65241282	0.0000336	HNSC_tumor	0.16	4.19
NEAT1	rs1784858	chr11	65222952	0.0000499	HNSC_tumor	0.15	4.09
NEAT1	rs1784859	chr11	65220749	0.0000489	HNSC_tumor	-0.15	-4.1
NEAT1	rs1784860	chr11	65240712	0.0000235	HNSC_tumor	0.16	4.27
NEAT1	rs2105608	chr11	65228618	0.0000712	HNSC_tumor	0.15	4.01
NEAT1	rs2508711	chr11	65243684	0.0000353	HNSC_tumor	0.16	4.17
NEAT1	rs2508712	chr11	65232261	0.0000484	HNSC_tumor	0.16	4.1
NEAT1	rs2846861	chr11	65222305	0.0000438	HNSC_tumor	0.16	4.12
NEAT1	rs2846862	chr11	65219790	0.0000623	HNSC_tumor	0.15	4.04