Gene name	Rsid	Chr	Position	P value	Cancer	Beta	T stat
ATF6	rs1006311	chr1	161811588	0.000284	BRCA_tumor	0.13	3.64
ATF6	rs10159039	chr1	161911373	0.0000000612	BRCA_tumor	-0.14	-5.45
ATF6	rs10645413	chr1	161812292	0.000225	BRCA_tumor	0.13	3.7
ATF6	rs10733046	chr1	161913252	0.0000000436	BRCA_tumor	-0.14	-5.52
ATF6	rs10737517	chr1	161908338	0.0000000167	BRCA_tumor	-0.14	-5.69
ATF6	rs10737518	chr1	161908391	0.0000000358	BRCA_tumor	-0.14	-5.55
ATF6	rs10737521	chr1	161932193	0.000513	BRCA_tumor	-0.08	-3.48
ATF6	rs10753679	chr1	161892936	0.00000266	BRCA_tumor	-0.12	-4.72
ATF6	rs10753685	chr1	161906482	0.0000000407	BRCA_tumor	-0.14	-5.53
ATF6	rs10800106	chr1	161893012	0.00000117	BRCA_tumor	-0.12	-4.89
ATF6	rs10800109	chr1	161897006	0.00000164	BRCA_tumor	-0.12	-4.82
ATF6	rs10800137	chr1	161912732	0.0000000403	BRCA_tumor	-0.14	-5.53
ATF6	rs10800157	chr1	161922277	0.0000000475	BRCA_tumor	-0.14	-5.5
ATF6	rs10918103	chr1	161842040	0.000529	BRCA_tumor	0.12	3.48
ATF6	rs10918214	chr1	161899461	0.000000344	BRCA_tumor	0.13	5.13
ATF6	rs10918215	chr1	161899731	0.0000124	BRCA_tumor	0.11	4.39
ATF6	rs10918224	chr1	161906113	0.0000000407	BRCA_tumor	-0.14	-5.53
ATF6	rs10918225	chr1	161906205	0.0000000407	BRCA_tumor	-0.14	-5.53
ATF6	rs10918227	chr1	161907066	0.0000000358	BRCA_tumor	-0.14	-5.55
ATF6	rs10918279	chr1	161917992	0.0000000393	BRCA_tumor	-0.14	-5.53
ATF6	rs10918290	chr1	161924364	0.0000000657	BRCA_tumor	-0.13	-5.44
ATF6	rs12029558	chr1	161802487	0.0000963	BRCA_tumor	0.14	3.91
ATF6	rs12030395	chr1	161858558	0.0000475	BRCA_tumor	0.14	4.08
ATF6	rs12032366	chr1	161802425	0.000175	BRCA_tumor	0.13	3.77
ATF6	rs12032568	chr1	161860940	0.0000999	BRCA_tumor	0.13	3.91
ATF6	rs12033716	chr1	161802426	0.000175	BRCA_tumor	0.13	3.77
ATF6	rs12033967	chr1	161871807	0.0000645	BRCA_tumor	0.14	4.01
ATF6	rs12036425	chr1	161870506	0.0000514	BRCA_tumor	0.14	4.07
ATF6	rs12036538	chr1	161739800	0.0000136	BRCA_tumor	0.16	4.37
ATF6	rs12037266	chr1	161745306	0.0000111	BRCA_tumor	0.15	4.42
ATF6	rs12040518	chr1	161881255	0.0000272	BRCA_tumor	0.14	4.21
ATF6	rs12040561	chr1	161744235	0.0000237	BRCA_tumor	0.14	4.25
ATF6	rs12042546	chr1	161823492	0.000346	BRCA_tumor	0.13	3.59
ATF6	rs12044770	chr1	161823821	0.0000334	BRCA_tumor	0.16	4.17
ATF6	rs12096504	chr1	161917749	0.0000000674	BRCA_tumor	-0.14	-5.44
ATF6	rs12142836	chr1	161907634	0.0000000358	BRCA_tumor	-0.14	-5.55
ATF6	rs12401299	chr1	161834446	0.000312	BRCA_tumor	-0.12	-3.62
ATF6	rs12405289	chr1	161816108	0.000362	BRCA_tumor	0.13	3.58
ATF6	rs12405533	chr1	161790544	0.0000284	BRCA_tumor	0.15	4.2
ATF6	rs12405964	chr1	161792199	0.0000318	BRCA_tumor	0.15	4.18
ATF6	rs12405965	chr1	161792201	0.0000318	BRCA_tumor	0.15	4.18
ATF6	rs12407444	chr1	161818028	0.000362	BRCA_tumor	0.13	3.58
ATF6	rs12408365	chr1	161830456	0.000614	BRCA_tumor	0.12	3.44
ATF6	rs12562272	chr1	161916140	0.0000000756	BRCA_tumor	-0.14	-5.42
ATF6	rs13401	chr1	161928568	0.0000000841	BRCA_tumor	-0.13	-5.4
ATF6	rs1354370	chr1	161808429	0.000232	BRCA_tumor	0.13	3.69
ATF6	rs139608488	chr1	161817911	0.000293	BRCA_tumor	0.13	3.63
ATF6	rs149694269	chr1	161803455	0.0003	BRCA_tumor	0.13	3.63
ATF6	rs150671627	chr1	161803122	0.0003	BRCA_tumor	0.13	3.63
ATF6	rs16827987	chr1	161905792	0.0000000188	BRCA_tumor	-0.14	-5.67
ATF6	rs16846931	chr1	161769763	0.0000353	BRCA_tumor	0.14	4.15
ATF6	rs16847602	chr1	161774764	0.0000404	BRCA_tumor	0.14	4.12
ATF6	rs16849963	chr1	161791247	0.0000475	BRCA_tumor	0.14	4.08
ATF6	rs16851622	chr1	161802049	0.00021	BRCA_tumor	-0.13	-3.72
ATF6	rs16853714	chr1	161817591	0.000293	BRCA_tumor	0.13	3.63
ATF6	rs1891020	chr1	161694454	0.000509	BRCA_tumor	0.08	3.49
ATF6	rs201657381	chr1	161896712	0.00000133	BRCA_tumor	-0.12	-4.86
ATF6	rs2089083	chr1	161795393	0.0000995	BRCA_tumor	0.14	3.91
ATF6	rs2089085	chr1	161741892	0.0000123	BRCA_tumor	0.15	4.39
ATF6	rs2134692	chr1	161752479	0.0000164	BRCA_tumor	0.15	4.33
ATF6	rs2340715	chr1	161805888	0.00038	BRCA_tumor	0.13	3.56
ATF6	rs2340716	chr1	161815977	0.000362	BRCA_tumor	0.13	3.58
ATF6	rs2341469	chr1	161862021	0.0000303	BRCA_tumor	0.14	4.19
ATF6	rs2341470	chr1	161923037	0.0000000149	BRCA_tumor	-0.14	-5.71
ATF6	rs2341473	chr1	161872771	0.0000645	BRCA_tumor	0.14	4.01
ATF6	rs2341474	chr1	161872980	0.0000645	BRCA_tumor	0.14	4.01
ATF6	rs2341476	chr1	161878626	0.0000549	BRCA_tumor	0.14	4.05
ATF6	rs2341477	chr1	161879184	0.00000802	BRCA_tumor	0.17	4.49
ATF6	rs2341480	chr1	161895938	0.00000074	BRCA_tumor	-0.13	-4.98
ATF6	rs2341481	chr1	161904498	0.000000305	BRCA_tumor	-0.13	-5.15
ATF6	rs2490442	chr1	161930908	0.000216	BRCA_tumor	-0.09	-3.71
ATF6	rs2499847	chr1	161932324	0.00000103	BRCA_tumor	-0.12	-4.91
ATF6	rs2499848	chr1	161931802	0.00000134	BRCA_tumor	-0.12	-4.86
ATF6	rs2499849	chr1	161931628	0.00000134	BRCA_tumor	-0.12	-4.86
ATF6	rs2499850	chr1	161931538	0.00000134	BRCA_tumor	-0.12	-4.86
ATF6	rs2499852	chr1	161931167	0.00000104	BRCA_tumor	-0.12	-4.91
ATF6	rs2499854	chr1	161930476	0.000224	BRCA_tumor	0.09	3.7
ATF6	rs2880056	chr1	161876448	0.00000598	BRCA_tumor	-0.15	-4.55
ATF6	rs3083543	chr1	161895246	0.00000136	BRCA_tumor	-0.12	-4.86
ATF6	rs34527534	chr1	161832393	0.000686	BRCA_tumor	0.12	3.41
ATF6	rs34703467	chr1	161901370	0.00000254	BRCA_tumor	-0.12	-4.73
ATF6	rs3795649	chr1	161931562	0.000763	BRCA_tumor	-0.08	-3.38
ATF6	rs3817084	chr1	161821235	0.000352	BRCA_tumor	0.13	3.59
ATF6	rs3839007	chr1	161931915	0.000000292	BRCA_tumor	-0.13	-5.16
ATF6	rs4147177	chr1	161858080	0.000056	BRCA_tumor	0.14	4.05
ATF6	rs4233378	chr1	161811449	0.000225	BRCA_tumor	0.13	3.7
ATF6	rs4233379	chr1	161875835	0.0000454	BRCA_tumor	0.14	4.09
ATF6	rs4278352	chr1	161872891	0.0000347	BRCA_tumor	0.14	4.16
ATF6	rs4494120	chr1	161741400	0.00000297	BRCA_tumor	0.17	4.7
ATF6	rs4570397	chr1	161903683	0.000000107	BRCA_tumor	0.13	5.35
ATF6	rs4625257	chr1	161870703	0.0000514	BRCA_tumor	0.14	4.07
ATF6	rs4656340	chr1	161925437	0.0000000149	BRCA_tumor	-0.14	-5.71
ATF6	rs4657102	chr1	161740414	0.00000907	BRCA_tumor	-0.15	-4.46
ATF6	rs4657104	chr1	161740626	0.0000136	BRCA_tumor	0.16	4.37
ATF6	rs4657110	chr1	161798239	0.000225	BRCA_tumor	0.13	3.7
ATF6	rs4657114	chr1	161805387	0.00038	BRCA_tumor	0.13	3.56
ATF6	rs4657115	chr1	161831507	0.000703	BRCA_tumor	0.12	3.4
ATF6	rs4657120	chr1	161876889	0.00000824	BRCA_tumor	0.17	4.48
ATF6	rs4657124	chr1	161909599	0.0000000589	BRCA_tumor	0.14	5.46
ATF6	rs4657125	chr1	161909963	0.000000116	BRCA_tumor	0.13	5.34
ATF6	rs4657126	chr1	161910039	0.00000000957	BRCA_tumor	0.14	5.78
ATF6	rs4657127	chr1	161911755	0.0000000116	BRCA_tumor	-0.14	-5.75
ATF6	rs55741033	chr1	161878420	0.0000447	BRCA_tumor	0.14	4.1
ATF6	rs55832042	chr1	161814033	0.000325	BRCA_tumor	0.13	3.61
ATF6	rs55876359	chr1	161813934	0.000325	BRCA_tumor	0.13	3.61
ATF6	rs56784074	chr1	161898417	0.00000101	BRCA_tumor	-0.12	-4.92
ATF6	rs58406542	chr1	161906090	0.0000000261	BRCA_tumor	-0.14	-5.61
ATF6	rs6427634	chr1	161863898	0.0000112	BRCA_tumor	0.17	4.41
ATF6	rs6427635	chr1	161863923	0.0000794	BRCA_tumor	0.14	3.96
ATF6	rs6427636	chr1	161864107	0.0000691	BRCA_tumor	0.13	3.99
ATF6	rs6427637	chr1	161864153	0.0000691	BRCA_tumor	0.13	3.99
ATF6	rs6427638	chr1	161864301	0.000113	BRCA_tumor	0.13	3.88
ATF6	rs6656937	chr1	161894092	0.000000356	BRCA_tumor	0.13	5.12
ATF6	rs6658423	chr1	161741486	0.0000151	BRCA_tumor	0.15	4.35
ATF6	rs6669438	chr1	161751221	0.00000955	BRCA_tumor	0.15	4.45
ATF6	rs6670429	chr1	161927885	0.0000000841	BRCA_tumor	-0.13	-5.4
ATF6	rs6672690	chr1	161812337	0.000225	BRCA_tumor	0.13	3.7
ATF6	rs6674081	chr1	161743772	0.0000111	BRCA_tumor	0.15	4.42
ATF6	rs6680543	chr1	161751163	0.0000101	BRCA_tumor	0.15	4.44
ATF6	rs6682575	chr1	161814755	0.000325	BRCA_tumor	0.13	3.61
ATF6	rs6687850	chr1	161862118	0.0000112	BRCA_tumor	0.17	4.41
ATF6	rs6695574	chr1	161928002	0.000000116	BRCA_tumor	-0.13	-5.34
ATF6	rs71744277	chr1	161869861	0.0000645	BRCA_tumor	0.14	4.01
ATF6	rs7412625	chr1	161875271	0.0000447	BRCA_tumor	0.14	4.1
ATF6	rs7417576	chr1	161897498	0.00000131	BRCA_tumor	-0.12	-4.87
ATF6	rs74530405	chr1	161877298	0.00000824	BRCA_tumor	0.17	4.48
ATF6	rs7513303	chr1	161806284	0.000247	BRCA_tumor	0.13	3.68
ATF6	rs7513427	chr1	161858893	0.0000446	BRCA_tumor	0.14	4.1
ATF6	rs7514053	chr1	161903035	0.00000138	BRCA_tumor	-0.12	-4.86
ATF6	rs7514226	chr1	161927103	0.0000000912	BRCA_tumor	-0.13	-5.38
ATF6	rs7516104	chr1	161902645	0.000000558	BRCA_tumor	-0.13	-5.04
ATF6	rs7519012	chr1	161879473	0.0000447	BRCA_tumor	0.14	4.1
ATF6	rs7522210	chr1	161927179	0.0000000841	BRCA_tumor	-0.13	-5.4
ATF6	rs7530408	chr1	161878305	0.0000549	BRCA_tumor	0.14	4.05
ATF6	rs7530997	chr1	161810151	0.000034	BRCA_tumor	0.15	4.16
ATF6	rs7534981	chr1	161806022	0.000247	BRCA_tumor	0.13	3.68
ATF6	rs7537054	chr1	161859287	0.0000541	BRCA_tumor	0.14	4.05
ATF6	rs75466595	chr1	161801760	0.000221	BRCA_tumor	0.13	3.71
ATF6	rs7554111	chr1	161810184	0.000212	BRCA_tumor	0.13	3.72
ATF6	rs76508876	chr1	161820329	0.000285	BRCA_tumor	0.13	3.64
ATF6	rs76577811	chr1	161801153	0.000152	BRCA_tumor	0.13	3.8
ATF6	rs76628156	chr1	161796059	0.0000995	BRCA_tumor	0.14	3.91
ATF6	rs76771026	chr1	161799118	0.000225	BRCA_tumor	0.13	3.7
ATF6	rs77487627	chr1	161831642	0.000703	BRCA_tumor	0.12	3.4
ATF6	rs78192567	chr1	161809407	0.000212	BRCA_tumor	0.13	3.72
ATF6	rs78671576	chr1	161861422	0.0000541	BRCA_tumor	0.14	4.05
ATF6	rs80095662	chr1	161865899	0.0000524	BRCA_tumor	0.14	4.06
ATF6	rs905596	chr1	161815204	0.000325	BRCA_tumor	0.13	3.61
ATF6	rs9283413	chr1	161925872	0.0000000677	BRCA_tumor	-0.13	-5.44
ATF6	rs9287066	chr1	161926569	0.000000419	BRCA_tumor	0.13	5.09
ATF6	rs9482	chr1	161928327	0.0000000841	BRCA_tumor	-0.13	-5.4
ATF6	rs955852	chr1	161830810	0.0000354	BRCA_tumor	0.16	4.15
ATF6	rs9659616	chr1	161918782	0.0000000129	BRCA_tumor	-0.14	-5.73
ATF6	rs9783050	chr1	161936020	0.000729	BRCA_tumor	-0.08	-3.39
ATF6	rs9783069	chr1	161936121	0.000511	BRCA_tumor	-0.08	-3.49
ATF6	rs12125079	chr1	161408556	0.0000101	COAD_tumor	-0.23	-4.5